RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	KATNAL1	Q9BW62	490 aa		19.64	■□□□□ 0.73
SPIN3-238	ENST00000640421	POLR3F	Q9H1D9	316 aa	Predicted RBP	19.64	■□□□□ 0.73
SPIN3-238	ENST00000640421	OLFML3	Q9NRN5	406 aa		19.64	■□□□□ 0.73
SPIN3-238	ENST00000640421	GRIN2D	O15399	1336 aa		19.64	■□□□□ 0.73
SPIN3-238	ENST00000640421	PLS3	P13797	630 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	GAP43	P17677	238 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	NMT1	P30419	496 aa	Known RBP	19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	ARL2	P36404	184 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	ACLY	P53396	1101 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	ADAM17	P78536	824 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	PSMD2	Q13200	908 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	PKN2	Q16513	984 aa	Known RBP	19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	NBPF20	Q3BBV1	942 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	LINC01465	Q8N7H1	131 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	PCSK9	Q8NBP7	692 aa	Known RBP	19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	ASAP3	Q8TDY4	903 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	KIFAP3	Q92845	792 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	MED15	Q96RN5	788 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	SUGCT	Q9HAC7	445 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	HDAC6	Q9UBN7	1215 aa		19.63	■□□□□ 0.73
SPIN3-238	ENST00000640421	GJB1	P08034	283 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	HOXC8	P31273	242 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	CLCN3	P51790	818 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	PEX3	P56589	373 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	ZNF200	P98182	395 aa	Predicted RBP	19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	MTHFD1L	Q6UB35	978 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	ADSSL1	Q8N142	457 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	MLKL	Q8NB16	471 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	ARMC5	Q96C12	935 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	NRCAM	Q92823	1304 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	MYB	P10242	640 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	GLRA2	P23416	452 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	EFCAB12	Q6NXP0	572 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	METTL13	Q8N6R0	699 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	KIFC3	Q9BVG8	833 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	RBSN	Q9H1K0	784 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	MRPL44	Q9H9J2	332 aa	Known RBP	19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	LARS	Q9P2J5	1176 aa	Known RBP	19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	SEL1L	Q9UBV2	794 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	ADGRA3	Q8IWK6	1321 aa		19.62	■□□□□ 0.73
SPIN3-238	ENST00000640421	NPTX2	P47972	431 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	ZNF165	P49910	485 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	KLHL10	Q6JEL2	608 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	EPM2AIP1	Q7L775	607 aa	Predicted RBP	19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	KSR1	Q8IVT5	923 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	FAM178B	Q8IXR5	827 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	RNF214	Q8ND24	703 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	SCFD1	Q8WVM8	642 aa		19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	PRPF31	Q8WWY3	499 aa	Known RBP	19.61	■□□□□ 0.73
SPIN3-238	ENST00000640421	MBLAC1	A4D2B0	266 aa	Predicted RBP	19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	RTP1	P59025	263 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	KCNA1	Q09470	495 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	NFRKB	Q6P4R8	1299 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	ZNF720	Q7Z2F6	126 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	C7orf31	Q8N865	590 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	TSEN34	Q9BSV6	310 aa	Known RBP	19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	CBX8	Q9HC52	389 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	RRN3P2	A6NIE6	340 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	SLC16A4	O15374	487 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	TREH	O43280	583 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	HOXD13	P35453	343 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	COBLL1	Q53SF7	1204 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	ARRDC4	Q8NCT1	418 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	STRA6	Q9BX79	667 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	OGDHL	Q9ULD0	1010 aa		19.6	■□□□□ 0.73
SPIN3-238	ENST00000640421	KIAA0100	Q14667	2235 aa	Known RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421		A0A1W2PQ45	241 aa	Predicted RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421		A0A1W2PQY0	241 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	MOXD2P	A6NHM9	499 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	MAGEB2	O15479	319 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	GAS2	O43903	313 aa	Known RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	PPP1R37	O75864	691 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	GCNT3	O95395	438 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	PMS1	P54277	932 aa	Known RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	NCKAP1L	P55160	1127 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	DMP1	Q13316	513 aa	Predicted RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	CAPS	Q13938	189 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	IQCB1	Q15051	598 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	IER5	Q5VY09	327 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	RUFY4	Q6ZNE9	571 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	DHX40	Q8IX18	779 aa	Known RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	EXOC8	Q8IYI6	725 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	JPH2	Q9BR39	696 aa	Predicted RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	IKZF4	Q9H2S9	585 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	C17orf75	Q9HAS0	396 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	SUCLA2	Q9P2R7	463 aa	Predicted RBP	19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	GTF2IRD1	Q9UHL9	959 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	CTNND2	Q9UQB3	1225 aa		19.59	■□□□□ 0.73
SPIN3-238	ENST00000640421	C17orf102	A2RUQ5	167 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421		K7ENM7	598 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	PRPF6	O94906	941 aa	Known RBP	19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	LAMTOR4	Q0VGL1	99 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	GDF6	Q6KF10	455 aa	Predicted RBP	19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	LUZP1	Q86V48	1076 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	KIAA0319L	Q8IZA0	1049 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	MYOCD	Q8IZQ8	938 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	GUF1	Q8N442	669 aa	Known RBP	19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	RETREG2	Q8NC44	543 aa		19.58	■□□□□ 0.73
SPIN3-238	ENST00000640421	TMEM161B	Q8NDZ6	487 aa		19.58	■□□□□ 0.73

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms