RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 TNIP3Q96KP6 325 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 PANX2Q96RD6 677 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 C6orf222P0C671 652 aaPredicted RBP11.86□□□□□ -0.51
SCN1B-208ENST00000640135 RASA1P20936 1047 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 SGO2Q562F6 1265 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 GOLGA8QA0A0J9YX86 632 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 GOLGA8OA6NCC3 632 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 GOLGA8NF8WBI6 632 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 DYNC1LI2O43237 492 aaPredicted RBP11.86□□□□□ -0.51
SCN1B-208ENST00000640135 STX2P32856 288 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 LAMC2Q13753 1193 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 CALN1Q9BXU9 219 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 CCSER1Q9C0I3 900 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 TMEM260Q9NX78 707 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 CEP72Q9P209 647 aa11.86□□□□□ -0.51
SCN1B-208ENST00000640135 EFCAB8A8MWE9 144 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 MIF4GDA9UHW6 222 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 NDUFAB1O14561 156 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 RGS2P41220 211 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 RBL2Q08999 1139 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 STILQ15468 1287 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ALKBH5Q6P6C2 394 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 SCARA5Q6ZMJ2 495 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 RAB44Q7Z6P3 723 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 GPD1LQ8N335 351 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 FAM213AQ9BRX8 229 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ASNSD1Q9NWL6 643 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 GAS2O43903 313 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 EPHX2P34913 555 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 VPS41P49754 854 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 CPT1AP50416 773 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 RNF180Q86T96 592 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 TADA2BQ86TJ2 420 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 DNAAF3Q8N9W5 541 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ACAP3Q96P50 834 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 PIDD1Q9HB75 910 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ADAM22Q9P0K1 906 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ECEL1O95672 775 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 INHBAP08476 426 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ACTN1P12814 892 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 VAMP7P51809 220 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 YWHAGP61981 247 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 HAUS6Q7Z4H7 955 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 VSIG1Q86XK7 387 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 DNAJC12Q9UKB3 198 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 RFX5P48382 616 aaPredicted RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 SAMD7Q7Z3H4 446 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 ANKRD13CQ8N6S4 541 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 RBM41Q96IZ5 413 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 TRIM56Q9BRZ2 755 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 MROH8Q9H579 483 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
SCN1B-208ENST00000640135 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
SCN1B-208ENST00000640135 LRRD1A4D1F6 860 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 HBP1O60381 514 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 PDHBP11177 359 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 RASSF2P50749 326 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SNRPFP62306 86 aaKnown RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 PDE1BQ01064 536 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 TRIM42Q8IWZ5 723 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 GLT1D1Q96MS3 346 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 RAB3IPQ96QF0 476 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 EHD4Q9H223 541 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 FAM8A1Q9UBU6 413 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 MID2Q9UJV3 735 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 CYP2B6P20813 491 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 KCNB1Q14721 858 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 DARS2Q6PI48 645 aaKnown RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SCN4BQ8IWT1 228 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 DDX50Q9BQ39 737 aaKnown RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 TMEM39BQ9GZU3 492 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 TDP2O95551 362 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 GSTA1P08263 222 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 GSTA2P09210 222 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 RWDD2BP57060 319 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 GBA2Q9HCG7 927 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SAMSN1Q9NSI8 373 aaKnown RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 HPCAL4Q9UM19 191 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
SCN1B-208ENST00000640135 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
SCN1B-208ENST00000640135 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms