RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ZNF655Q8N720 491 aaPredicted RBP7.16□□□□□ -1.26
ATM-229ENST00000639953 CNNM2Q9H8M5 875 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 ECM29Q5VYK3 1845 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 AKAP11Q9UKA4 1901 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 ATP5JP18859 108 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 PRDX5P30044 214 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 PCBP3P57721 371 aaKnown RBP7.15□□□□□ -1.26
ATM-229ENST00000639953 RNF4P78317 190 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 FSTL1Q12841 308 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 HSP90AB4PQ58FF6 505 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 GORABQ5T7V8 394 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 CEP128Q6ZU80 1094 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 STOX1Q6ZVD7 989 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 HHIPL1Q96JK4 782 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 C20orf173Q96LM9 149 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 TCEANC2Q96MN5 208 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 PLCD4Q9BRC7 762 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 GLIS2Q9BZE0 524 aaPredicted RBP7.15□□□□□ -1.26
ATM-229ENST00000639953 EHMT1Q9H9B1 1298 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 GPR108Q9NPR9 543 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 GGA3Q9NZ52 723 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 GGT7Q9UJ14 662 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 CNOT6Q9ULM6 557 aaKnown RBP7.15□□□□□ -1.26
ATM-229ENST00000639953 RBM8AQ9Y5S9 174 aaKnown RBP7.15□□□□□ -1.26
ATM-229ENST00000639953 MYO3BQ8WXR4 1341 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 RAD50Q92878 1312 aa7.15□□□□□ -1.26
ATM-229ENST00000639953 TRPM7Q96QT4 1865 aa7.15□□□□□ -1.27
ATM-229ENST00000639953 OR14I1A6ND48 311 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 ADM5C9JUS6 153 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 MEIS1O00470 390 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 WNT10BO00744 389 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 SLC27A2O14975 620 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 NRDCO43847 1150 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 SEMA7AO75326 666 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 REC8O95072 547 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 BAG4O95429 457 aaKnown RBP7.14□□□□□ -1.27
ATM-229ENST00000639953 HSPA6P17066 643 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 MCAMP43121 646 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 RBM5P52756 815 aaKnown RBP eCLIP7.14□□□□□ -1.27
ATM-229ENST00000639953 AK2P54819 239 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 FKBP1AP62942 108 aaKnown RBP7.14□□□□□ -1.27
ATM-229ENST00000639953 SSPNQ14714 243 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 BBS9Q3SYG4 887 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 CFAP100Q494V2 611 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 TTC39AQ5SRH9 613 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 VPS53Q5VIR6 699 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 PRAMEF18Q5VWM3 479 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 CREB3L3Q68CJ9 461 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 USP48Q86UV5 1035 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 ERC1Q8IUD2 1116 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 TMEM192Q8IY95 271 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 MAP4K1Q92918 833 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 EVI5LQ96CN4 794 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 MAP6Q96JE9 813 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 HAUS7Q99871 368 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 RPAP1Q9BWH6 1393 aaPredicted RBP7.14□□□□□ -1.27
ATM-229ENST00000639953 GNL3LQ9NVN8 582 aaKnown RBP7.14□□□□□ -1.27
ATM-229ENST00000639953 HMG20BQ9P0W2 317 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 PGAP2Q9UHJ9 254 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 HDAC9Q9UKV0 1011 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 MYH2Q9UKX2 1941 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 KCTD3Q9Y597 815 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 PCNTO95613 3336 aa7.14□□□□□ -1.27
ATM-229ENST00000639953 CCDC171Q6TFL3 1326 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 PASKQ96RG2 1323 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 CLRN2A0PK11 232 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 M0R2C6 588 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 ERCC3P19447 782 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 HOXA5P20719 270 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 KIR2DL1P43626 348 aaPredicted RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 KIR2DL2P43627 348 aaPredicted RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 DLGAP5Q15398 846 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 NECAB1Q8N987 351 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 TBC1D22AQ8WUA7 517 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 DCPSQ96C86 337 aaKnown RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 ZBED3Q96IU2 234 aaPredicted RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 PRMT6Q96LA8 375 aaPredicted RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 DNAJC2Q99543 621 aaKnown RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 TDRD3Q9H7E2 651 aaKnown RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 ZNF408Q9H9D4 720 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 LMBRD1Q9NUN5 540 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 ABCF2Q9UG63 623 aa7.13□□□□□ -1.27
ATM-229ENST00000639953 MBD1Q9UIS9 605 aaPredicted RBP7.13□□□□□ -1.27
ATM-229ENST00000639953 B8ZZF3 427 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 SIGLEC6O43699 453 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 CLEC3AO75596 197 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 NME1P15531 152 aaKnown RBP7.12□□□□□ -1.27
ATM-229ENST00000639953 BMP7P18075 431 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 CACNB3P54284 484 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 TOB2Q14106 344 aaPredicted RBP7.12□□□□□ -1.27
ATM-229ENST00000639953 CCDC158Q5M9N0 1113 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 CST9Q5W186 159 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 CLEC17AQ6ZS10 378 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 KRT26Q7Z3Y9 468 aa7.12□□□□□ -1.27
ATM-229ENST00000639953 SPATA5Q8NB90 893 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms