RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 VTA1Q9NP79 307 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 NMRK2Q9NPI5 230 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 PAXBP1Q9Y5B6 917 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 MAFBQ9Y5Q3 323 aaPredicted RBP6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 ZNF236Q9UL36 1845 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 ASTN1O14525 1302 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 PHLPP2Q6ZVD8 1323 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 SYNGAP1Q96PV0 1343 aa6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 MYH9P35579 1960 aaKnown RBP6.91□□□□□ -1.3
CACNA1D-227ENST00000637844 ZNFX1Q9P2E3 1918 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 IGKV6D-21A0A0A0MT36 114 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 TTC26A0AVF1 554 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 SLC15A5A6NIM6 579 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 CLIC2O15247 247 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 ZNF862O60290 1169 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 EXOC3O60645 756 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GH1P01241 217 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 TXNP10599 105 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 ADORA2AP29274 412 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 TCF7P36402 384 aaPredicted RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 CYP2J2P51589 502 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 NPEPPSP55786 919 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 KRT83P78385 493 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GTF2BQ00403 316 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GOLGA8FQ08AF8 430 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GOLGA8DPQ0D2H9 430 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 SREBF2Q12772 1141 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 KCNH2Q12809 1159 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 STRN3Q13033 797 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 MAPK7Q13164 816 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 LAMC2Q13753 1193 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 EMC2Q15006 297 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 LY6KQ17RY6 165 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 FAM110CQ1W6H9 321 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 DCAF17Q5H9S7 520 aaPredicted RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 CELF3Q5SZQ8 465 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 RGMBQ6NW40 437 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 ARMCX2Q7L311 632 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 PLPPR4Q7Z2D5 763 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GPR142Q7Z601 462 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 FMNL3Q8IVF7 1028 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 FBXO16Q8IX29 292 aaPredicted RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 DAW1Q8N136 415 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 AFAP1L1Q8TED9 768 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 TCP11Q8WWU5 503 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 BBXQ8WY36 941 aaPredicted RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 GLG1Q92896 1179 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 PPP1R13BQ96KQ4 1090 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 PRIMPOLQ96LW4 560 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 C16orf45Q96MC5 204 aaPredicted RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 SPATA33Q96N06 139 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 NIFKQ9BYG3 293 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 POLR3FQ9H1D9 316 aaPredicted RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 PORCNQ9H237 461 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 SMARCAD1Q9H4L7 1026 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 POLD4Q9HCU8 107 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 AGPAT3Q9NRZ7 376 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 TRMT1Q9NXH9 659 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 DIS3Q9Y2L1 958 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 R3HCC1Q9Y3T6 440 aaKnown RBP6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 EMSYQ7Z589 1322 aa6.9□□□□□ -1.3
CACNA1D-227ENST00000637844 ZMYM2Q9UBW7 1377 aa6.9□□□□□ -1.31
CACNA1D-227ENST00000637844 GSTTP1A0A1W2PQM5 241 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 DENND3A2RUS2 1198 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM150BA6NC51 233 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 NKRFO15226 690 aaKnown RBP eCLIP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 MAPK13O15264 365 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 SLC16A4O15374 487 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 TGFB1I1O43294 461 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 N4BP1O75113 896 aaKnown RBP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 PPP1R37O75864 691 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 AKAP3O75969 853 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 HOXD13P35453 343 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 NAMPTP43490 491 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 NPTX2P47972 431 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 TERF1P54274 439 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 FSTL1Q12841 308 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 E4F1Q66K89 784 aaPredicted RBP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 GBP6Q6ZN66 633 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 INTS8Q75QN2 995 aaKnown RBP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 RASAL3Q86YV0 1011 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM139Q8IV31 216 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 C12orf56Q8IXR9 622 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 CCDC170Q8IYT3 715 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 MSL3Q8N5Y2 521 aaKnown RBP6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 XXYLT1Q8NBI6 393 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 KIF18AQ8NI77 898 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 DEPTORQ8TB45 409 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 TMEM174Q8WUU8 243 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 ZNF592Q92610 1267 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 CCDC102AQ96A19 550 aa6.89□□□□□ -1.31
CACNA1D-227ENST00000637844 BICD1Q96G01 975 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms