RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FGF18O76093 207 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 TDP2O95551 362 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 ZSCAN20P17040 1043 aaPredicted RBP20.81■□□□□ 0.92
CLN6-220ENST00000637450 GPC3P51654 580 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 TBC1D8BQ0IIM8 1120 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 CSPP1Q1MSJ5 1256 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 GALNT17Q6IS24 598 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 MIER3Q7Z3K6 550 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 RBM23Q86U06 439 aaKnown RBP20.81■□□□□ 0.92
CLN6-220ENST00000637450 MICAL1Q8TDZ2 1067 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 MBOAT7Q96N66 472 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 CASD1Q96PB1 797 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 NIFKQ9BYG3 293 aaKnown RBP20.81■□□□□ 0.92
CLN6-220ENST00000637450 UPF3BQ9BZI7 483 aaKnown RBP20.81■□□□□ 0.92
CLN6-220ENST00000637450 TMEM117Q9H0C3 514 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 RNF19AQ9NV58 838 aa20.81■□□□□ 0.92
CLN6-220ENST00000637450 HOXA2O43364 376 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 STBD1O95210 358 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 DARSP14868 501 aaKnown RBP20.8■□□□□ 0.92
CLN6-220ENST00000637450 COASYQ13057 564 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 STK3Q13188 491 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 XKR3Q5GH77 459 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 CPLX2Q6PUV4 134 aaKnown RBP20.8■□□□□ 0.92
CLN6-220ENST00000637450 MOXD1Q6UVY6 613 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 LRRC55Q6ZSA7 311 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 THNSL1Q8IYQ7 743 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 ETNPPLQ8TBG4 499 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 ZNF668Q96K58 619 aaPredicted RBP20.8■□□□□ 0.92
CLN6-220ENST00000637450 AIFM3Q96NN9 605 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 CEP89Q96ST8 783 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 POP1Q99575 1024 aaKnown RBP20.8■□□□□ 0.92
CLN6-220ENST00000637450 TLE6Q9H808 572 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 TLR9Q9NR96 1032 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 PDRG1Q9NUG6 133 aa20.8■□□□□ 0.92
CLN6-220ENST00000637450 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
CLN6-220ENST00000637450 GLP2RO95838 553 aa20.79■□□□□ 0.92
CLN6-220ENST00000637450 LAG3P18627 525 aa20.79■□□□□ 0.92
CLN6-220ENST00000637450 ERVFC1P60507 584 aa20.79■□□□□ 0.92
CLN6-220ENST00000637450 PDE12Q6L8Q7 609 aaKnown RBP20.79■□□□□ 0.92
CLN6-220ENST00000637450 ECHDC2Q86YB7 292 aa20.79■□□□□ 0.92
CLN6-220ENST00000637450 SMRP1Q8NCR6 262 aa20.79■□□□□ 0.92
CLN6-220ENST00000637450 LZTS1Q9Y250 596 aa20.79■□□□□ 0.92
CLN6-220ENST00000637450 IGKV6-21A0A0C4DH24 114 aa20.78■□□□□ 0.92
CLN6-220ENST00000637450 FSCN2O14926 492 aa20.78■□□□□ 0.92
CLN6-220ENST00000637450 CDC42EP1Q00587 391 aa20.78■□□□□ 0.92
CLN6-220ENST00000637450 PLCB3Q01970 1234 aa20.78■□□□□ 0.92
CLN6-220ENST00000637450 DRP2Q13474 957 aa20.78■□□□□ 0.92
CLN6-220ENST00000637450 NONOQ15233 471 aaKnown RBP eCLIP20.78■□□□□ 0.926e-7■■■□□ 17.3
CLN6-220ENST00000637450 NLRP7Q8WX94 980 aa20.78■□□□□ 0.92
CLN6-220ENST00000637450 BARX2Q9UMQ3 279 aaPredicted RBP20.78■□□□□ 0.92
CLN6-220ENST00000637450 KIAA1671Q9BY89 1806 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 A0A0U1RQF3 1178 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 PER2O15055 1255 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 FGFR4P22455 802 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 INF2Q27J81 1249 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 MTERF2Q49AM1 385 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 KRT25Q7Z3Z0 450 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 ZNF598Q86UK7 904 aaKnown RBP20.77■□□□□ 0.92
CLN6-220ENST00000637450 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
CLN6-220ENST00000637450 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 CDCA3Q99618 268 aaPredicted RBP20.77■□□□□ 0.92
CLN6-220ENST00000637450 SEPT9Q9UHD8 586 aaPredicted RBP20.77■□□□□ 0.92
CLN6-220ENST00000637450 DDX25Q9UHL0 483 aaKnown RBP20.77■□□□□ 0.92
CLN6-220ENST00000637450 KCNJ14Q9UNX9 436 aa20.77■□□□□ 0.92
CLN6-220ENST00000637450 FNDC1Q4ZHG4 1894 aaPredicted RBP20.76■□□□□ 0.91
CLN6-220ENST00000637450 TMEM150BA6NC51 233 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 EOMESO95936 686 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 DNM2P50570 870 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 SCRN1Q12765 414 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 DUSP6Q16828 381 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 KCNT2Q6UVM3 1135 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 ABI1Q8IZP0 508 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 LRRC43Q8N309 656 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 SH2D3AQ9BRG2 576 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 PHF20Q9BVI0 1012 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 GCOM2Q9BZD3 368 aaPredicted RBP20.76■□□□□ 0.91
CLN6-220ENST00000637450 CHST12Q9NRB3 414 aa20.76■□□□□ 0.91
CLN6-220ENST00000637450 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
CLN6-220ENST00000637450 FSD2A1L4K1 749 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 DDX11L8A8MPP1 907 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 SLC37A4O43826 429 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 MAFO75444 373 aaPredicted RBP20.75■□□□□ 0.91
CLN6-220ENST00000637450 CSDE1O75534 798 aaKnown RBP20.75■□□□□ 0.91
CLN6-220ENST00000637450 CDKL5O76039 1030 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 HERC4Q5GLZ8 1057 aaPredicted RBP20.75■□□□□ 0.91
CLN6-220ENST00000637450 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 RNF135Q8IUD6 432 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 RNF169Q8NCN4 708 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 VN1R2Q8NFZ6 395 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 ZNF558Q96NG5 402 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 TRIOO75962 3097 aa20.75■□□□□ 0.91
CLN6-220ENST00000637450 EML1O00423 815 aa20.74■□□□□ 0.91
CLN6-220ENST00000637450 ATF7P17544 494 aaPredicted RBP20.74■□□□□ 0.91
CLN6-220ENST00000637450 PPM1AP35813 382 aa20.74■□□□□ 0.91
CLN6-220ENST00000637450 PSMC5P62195 406 aa20.74■□□□□ 0.91
CLN6-220ENST00000637450 RBM10P98175 930 aaKnown RBP20.74■□□□□ 0.91
CLN6-220ENST00000637450 LETM2Q2VYF4 491 aa20.74■□□□□ 0.91
CLN6-220ENST00000637450 ANO5Q75V66 913 aa20.74■□□□□ 0.91
CLN6-220ENST00000637450 KCNMB3Q9NPA1 279 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms