RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	SORBS1	Q9BX66	1292 aa	Known RBP	2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	STK33	Q9BYT3	514 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	TRIM6	Q9C030	488 aa	Predicted RBP	2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	MKRN2	Q9H000	416 aa	Known RBP	2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	C2orf40	Q9H1Z8	148 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	GHITM	Q9H3K2	345 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	PCIF1	Q9H4Z3	704 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	SYNC	Q9H7C4	482 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZNF395	Q9H8N7	513 aa	Predicted RBP	2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	CNTD2	Q9H8S5	307 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	TRPV4	Q9HBA0	871 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZNF287	Q9HBT7	754 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	SAYSD1	Q9NPB0	183 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	GPR27	Q9NS67	375 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	HPF1	Q9NWY4	346 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	GGA3	Q9NZ52	723 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZSWIM5	Q9P217	1185 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	DKK3	Q9UBP4	350 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	CGGBP1	Q9UFW8	167 aa	Predicted RBP	2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	TBK1	Q9UHD2	729 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	CTNNA3	Q9UI47	895 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	BLOC1S6	Q9UL45	172 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	OGDHL	Q9ULD0	1010 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	RNF112	Q9ULX5	631 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	TMEM5	Q9Y2B1	443 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	STXBP5L	Q9Y2K9	1186 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	COQ6	Q9Y2Z9	468 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	MTF2	Q9Y483	593 aa	Predicted RBP	2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	ZNF451	Q9Y4E5	1061 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	SPO11	Q9Y5K1	396 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	ASXL2	Q76L83	1435 aa		2.92	□□□□□ -1.94
GABRB3-223	ENST00000637293	LOC102724428	A0A0B4J2F2	783 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	C17orf113	A0A1B0GUU1	675 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CCDC69	A6NI79	296 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TMEM110-MUSTN1	A8MSY1	372 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ISM1	B1AKI9	464 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PI4K2B	G5E9Z4	385 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293		H0Y626	953 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	RTCA	O00442	366 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PES1	O00541	588 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ACKR2	O00590	384 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	WNT9A	O14904	365 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PHGDH	O43175	533 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TGM5	O43548	720 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	KDM1A	O60341	852 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	DOK2	O60496	412 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SGPL1	O95470	568 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SCGB1D1	O95968	90 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	MT-ND3	P03897	115 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ALDH2	P05091	517 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	GSN	P06396	782 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CKM	P06732	381 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SRGAP2C	P0DJJ0	459 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SRGAP2B	P0DMP2	458 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	RPS2	P15880	293 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	TSHR	P16473	764 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ITIH2	P19823	946 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ENPP1	P22413	925 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CD40	P25942	277 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	EEF1G	P26641	437 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	MSX1	P28360	303 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	HOXD13	P35453	343 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SERPINF1	P36955	418 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PHKA1	P46020	1223 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	POLD2	P49005	469 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	MTNR1B	P49286	362 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	DNM2	P50570	870 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	NR1H2	P55055	460 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CSE1L	P55060	971 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CASP6	P55212	293 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SIK1	P57059	783 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	RNF4	P78317	190 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SMAD3	P84022	425 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	AMPD2	Q01433	879 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	UBE3A	Q05086	875 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	LRRC74A	Q0VAA2	488 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	GALNT1	Q10472	559 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ADAM15	Q13444	863 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PRPF4B	Q13523	1007 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PMS2P11	Q13670	270 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	AUH	Q13825	339 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	IKBKE	Q14164	716 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ERV3-1	Q14264	604 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PTK2B	Q14289	1009 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	INPP5A	Q14642	412 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	WTAP	Q15007	396 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	E2F5	Q15329	346 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SF1	Q15637	639 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	SMAD2	Q15796	467 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ASIC2	Q16515	512 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	CRY1	Q16526	586 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FSCN1	Q16658	493 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	KIZ	Q2M2Z5	673 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PAN2	Q504Q3	1202 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	PKDCC	Q504Y2	493 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	VARS2	Q5ST30	1063 aa	Known RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	NAA16	Q6N069	864 aa	Predicted RBP	2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	FIGNL1	Q6PIW4	674 aa		2.91	□□□□□ -1.94
GABRB3-223	ENST00000637293	ADGRD1	Q6QNK2	874 aa		2.91	□□□□□ -1.94

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