RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 UQCRHP07919 91 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 NPTX2P47972 431 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 NCKAP1LP55160 1127 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 FKBP1BP68106 108 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 GTF2BQ00403 316 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 TSR1Q2NL82 804 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 TCERG1LQ5VWI1 586 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 SPRYD7Q5W111 196 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 FBXO16Q8IX29 292 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 SLC35C1Q96A29 364 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 IRX2Q9BZI1 471 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 NLRC4Q9NPP4 1024 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 LZTFL1Q9NQ48 299 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 EPN1Q9Y6I3 576 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 PLEKP08567 350 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 PSMC2P35998 433 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 TERF1P54274 439 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 ETF1P62495 437 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 RRAGAQ7L523 313 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 FAM186BQ8IYM0 893 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 RDH13Q8NBN7 331 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 ZSWIM2Q8NEG5 633 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 SHCBP1Q8NEM2 672 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 ACCSQ96QU6 501 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 PDGFCQ9NRA1 345 aa17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 REXO2Q9Y3B8 237 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-231ENST00000636816 LRRC53A6NM62 1247 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 NDUFA10O95299 355 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 TGFB3P10600 412 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 ACTN1P12814 892 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 SLC9A1P19634 815 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 NEDD9Q14511 834 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 MYRIPQ8NFW9 859 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 COPS5Q92905 334 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 METTL14Q9HCE5 456 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 DNAI1Q9UI46 699 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 PAXBP1Q9Y5B6 917 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 DGAT1O75907 488 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 OATP04181 439 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 TCF7P36402 384 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 DPY19L2P1Q6NXN4 242 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 ANKRD23Q86SG2 305 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 TMEM161BQ8NDZ6 487 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 KIF18AQ8NI77 898 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 ST6GALNAC4Q9H4F1 302 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 TMEM206Q9H813 350 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 NHEJ1Q9H9Q4 299 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 MLXIPQ9HAP2 919 aa17.39■□□□□ 0.37
CACNA1A-231ENST00000636816 PLXNA1Q9UIW2 1896 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 PLXNB2O15031 1838 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 KIF2AO00139 706 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 POLR2FP61218 127 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 HSDL1Q3SXM5 330 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 METTL7BQ6UX53 244 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 CACNA2D4Q7Z3S7 1137 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 WDR24Q96S15 920 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 KMT5AQ9NQR1 393 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 ZNHIT6Q9NWK9 470 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 TFR2Q9UP52 801 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 PLAGL2Q9UPG8 496 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 SLC45A1Q9Y2W3 748 aa17.38■□□□□ 0.37
CACNA1A-231ENST00000636816 ANKRD63C9JTQ0 380 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 EXOC3O60645 756 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 ITGBL1O95965 494 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 HNRNPH3P31942 346 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 ALCAMQ13740 583 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 PDXDC1Q6P996 788 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 SLC9A9Q8IVB4 645 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 MORC4Q8TE76 937 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 TSC1Q92574 1164 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 KIFAP3Q92845 792 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 TMEM143Q96AN5 459 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 CEP89Q96ST8 783 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 MPHOSPH6Q99547 160 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 POLR3FQ9H1D9 316 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 GANQ9H2C0 597 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 ARHGAP20Q9P2F6 1191 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 TBX20Q9UMR3 447 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 DENND3A2RUS2 1198 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 GOLGA6L9A6NEM1 432 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 PON1P27169 355 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 ADORA2AP29274 412 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 STAT5BP51692 787 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 DMP1Q13316 513 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 CELF3Q5SZQ8 465 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 GOLGA5Q8TBA6 731 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 SEPT1Q8WYJ6 367 aa17.37■□□□□ 0.37
CACNA1A-231ENST00000636816 MKNK1Q9BUB5 465 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms