RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 RRN3P2A6NIE6 340 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 H3BRB1 525 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 HAS3O00219 553 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 BACH1O14867 736 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 CTAGE5O15320 804 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 DYNC1LI2O43237 492 aaPredicted RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 HBP1O60381 514 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 GNAT1P11488 350 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 SCP2P22307 547 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 MARCKSP29966 332 aaPredicted RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 HOXC8P31273 242 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 ABCD1P33897 745 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 STAT5BP51692 787 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 CEBPZQ03701 1054 aaKnown RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 LRRC41Q15345 812 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 TMEM119Q4V9L6 283 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 GNASQ5JWF2 1037 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 PRAMEF19Q5SWL8 479 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 CCSAPQ6IQ19 270 aaPredicted RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 KANK3Q6NY19 840 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 PDXDC2PQ6P474 469 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 NFRKBQ6P4R8 1299 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 CABP7Q86V35 215 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 CCDC60Q8IWA6 550 aaPredicted RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 ATP8B4Q8TF62 1192 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 U2AF1L4Q8WU68 220 aaKnown RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 AFG1LQ8WV93 481 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 ITPKCQ96DU7 683 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 GLT1D1Q96MS3 346 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 C16orf70Q9BSU1 422 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 TNMDQ9H2S6 317 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 TUT1Q9H6E5 874 aaKnown RBP7.5□□□□□ -1.21
UPF3B-205ENST00000636792 HPSEQ9Y251 543 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 PHLPP2Q6ZVD8 1323 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 NRCAMQ92823 1304 aa7.5□□□□□ -1.21
UPF3B-205ENST00000636792 A0A0U1RQG5 324 aaPredicted RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 DDX39AO00148 427 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 MAGEB2O15479 319 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CHMP2AO43633 222 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CAND2O75155 1236 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 EYA4O95677 639 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 ASGR1P07306 291 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 SPATA31C1P0DKV0 1188 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CCT6AP40227 531 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 RFC5P40937 340 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 ACLYP53396 1101 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 AMPD3Q01432 767 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 PRKCEQ02156 737 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 IL17AQ16552 155 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 ZNF484Q5JVG2 852 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CNNM4Q6P4Q7 775 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 SHC4Q6S5L8 630 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CATSPER3Q86XQ3 398 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 IQUBQ8NA54 791 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 RASSF8Q8NHQ8 419 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 SPIRE2Q8WWL2 714 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 LARP4BQ92615 738 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 GLG1Q92896 1179 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 COPS5Q92905 334 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CCDC43Q96MW1 224 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 TIGD1Q96MW7 591 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CNTNAP3BQ96NU0 1288 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 MMTAG2Q9BU76 263 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 NIFKQ9BYG3 293 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 CNTNAP3Q9BZ76 1288 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 GTPBP4Q9BZE4 634 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 NRBP2Q9NSY0 501 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 GABBR1Q9UBS5 961 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 KCNG1Q9UIX4 513 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 HOOK1Q9UJC3 728 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 DNM3Q9UQ16 869 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 DDX49Q9Y6V7 483 aaKnown RBP7.49□□□□□ -1.21
UPF3B-205ENST00000636792 PCNTO95613 3336 aa7.49□□□□□ -1.21
UPF3B-205ENST00000636792 KIAA0100Q14667 2235 aaKnown RBP7.48□□□□□ -1.21
UPF3B-205ENST00000636792 SIP14410 1827 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 EML1O00423 815 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 SLITRK3O94933 977 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 PGK1P00558 417 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 PFKFB1P16118 471 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 NDUFV2P19404 249 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 YWHABP31946 246 aaKnown RBP7.48□□□□□ -1.21
UPF3B-205ENST00000636792 STAT6P42226 847 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 SYKP43405 635 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 CDC42EP1Q00587 391 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 RBL2Q08999 1139 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 GRB10Q13322 594 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 SNX17Q15036 470 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 AGERQ15109 404 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 MTFR1Q15390 333 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 KCNA10Q16322 511 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 GJC2Q5T442 439 aaPredicted RBP7.48□□□□□ -1.21
UPF3B-205ENST00000636792 RRAGBQ5VZM2 374 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 SWSAP1Q6NVH7 229 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 RPAINQ86UA6 219 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 CEP57L1Q8IYX8 460 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 SLC43A3Q8NBI5 491 aa7.48□□□□□ -1.21
UPF3B-205ENST00000636792 RETREG2Q8NC44 543 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms