RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LETM2Q2VYF4 491 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 KIAA0319Q5VV43 1072 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 PHLDB3Q6NSJ2 640 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 PSTPIP2Q9H939 334 aa20.73■□□□□ 0.91
CLN6-212ENST00000636020 USP24Q9UPU5 2620 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 IGKV6D-21A0A0A0MT36 114 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 ZBTB42B2RXF5 422 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 N4BP1O75113 896 aaKnown RBP20.72■□□□□ 0.91
CLN6-212ENST00000636020 ZNF484Q5JVG2 852 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 PPFIBP1Q86W92 1011 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 TMEM173Q86WV6 379 aaPredicted RBP20.72■□□□□ 0.91
CLN6-212ENST00000636020 SLC44A3Q8N4M1 653 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 RRP36Q96EU6 259 aaKnown RBP20.72■□□□□ 0.91
CLN6-212ENST00000636020 SDF4Q9BRK5 362 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 SPZ1Q9BXG8 430 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 SIT1Q9Y3P8 196 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 COL1A2P08123 1366 aa20.72■□□□□ 0.91
CLN6-212ENST00000636020 IFIT3O14879 490 aaKnown RBP20.71■□□□□ 0.91
CLN6-212ENST00000636020 KINO60870 393 aaKnown RBP20.71■□□□□ 0.91
CLN6-212ENST00000636020 VTNP04004 478 aa20.71■□□□□ 0.91
CLN6-212ENST00000636020 ZSCAN20P17040 1043 aaPredicted RBP20.71■□□□□ 0.91
CLN6-212ENST00000636020 NONOQ15233 471 aaKnown RBP eCLIP20.71■□□□□ 0.918e-7■■■□□ 15.9
CLN6-212ENST00000636020 DDX53Q86TM3 631 aaKnown RBP20.71■□□□□ 0.91
CLN6-212ENST00000636020 ZNF598Q86UK7 904 aaKnown RBP20.71■□□□□ 0.91
CLN6-212ENST00000636020 RNF169Q8NCN4 708 aa20.71■□□□□ 0.91
CLN6-212ENST00000636020 HELQQ8TDG4 1101 aa20.71■□□□□ 0.91
CLN6-212ENST00000636020 MXRA8Q9BRK3 442 aa20.71■□□□□ 0.91
CLN6-212ENST00000636020 C2orf16Q68DN1 1984 aa20.7■□□□□ 0.9
CLN6-212ENST00000636020 SRFP11831 508 aa20.7■□□□□ 0.9
CLN6-212ENST00000636020 UBE2SQ16763 222 aa20.7■□□□□ 0.9
CLN6-212ENST00000636020 VARS2Q5ST30 1063 aaKnown RBP20.7■□□□□ 0.9
CLN6-212ENST00000636020 C15orf39Q6ZRI6 1047 aa20.7■□□□□ 0.9
CLN6-212ENST00000636020 MAML2Q8IZL2 1156 aaPredicted RBP20.7■□□□□ 0.9
CLN6-212ENST00000636020 GPR161Q8N6U8 529 aaKnown RBP20.7■□□□□ 0.9
CLN6-212ENST00000636020 MRPL9Q9BYD2 267 aaKnown RBP20.7■□□□□ 0.9
CLN6-212ENST00000636020 PCDHA6Q9UN73 950 aa20.7■□□□□ 0.9
CLN6-212ENST00000636020 PCDHA8Q9Y5H6 950 aa20.7■□□□□ 0.9
CLN6-212ENST00000636020 A0A0U1RQF3 1178 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 POTEMA6NI47 508 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 C22orf31O95567 290 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 ITGB3BPQ13352 177 aaPredicted RBP20.69■□□□□ 0.9
CLN6-212ENST00000636020 POTEGQ6S5H5 508 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 BORCS6Q96GS4 357 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 IGSF21Q96ID5 467 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 NCDNQ9UBB6 729 aa20.69■□□□□ 0.9
CLN6-212ENST00000636020 ERICH2A1L162 156 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 SPDYE3A6NKU9 549 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 SPDYE4A6NLX3 237 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 GLULP15104 373 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 SMARCA1P28370 1054 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 CLCN4P51793 760 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 WTAPQ15007 396 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 PTPN14Q15678 1187 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 ABHD15Q6UXT9 468 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 GPR152Q8TDT2 470 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 BCL7CQ8WUZ0 217 aaPredicted RBP20.68■□□□□ 0.9
CLN6-212ENST00000636020 NXPE3Q969Y0 559 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 DIAPH3Q9NSV4 1193 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 EPS15L1Q9UBC2 864 aa20.68■□□□□ 0.9
CLN6-212ENST00000636020 SEC63Q9UGP8 760 aaKnown RBP20.68■□□□□ 0.9
CLN6-212ENST00000636020 PRR5-ARHGAP8B1AHC4 643 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 BACH1O14867 736 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 CCNE2O96020 404 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 ATP4AP20648 1035 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 GBP2P32456 591 aaPredicted RBP20.67■□□□□ 0.9
CLN6-212ENST00000636020 ARHGAP8P85298 464 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 TRDNQ13061 729 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 ZNF528Q3MIS6 628 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 FAM160B1Q5W0V3 765 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 CMASQ8NFW8 434 aaPredicted RBP20.67■□□□□ 0.9
CLN6-212ENST00000636020 KLHL5Q96PQ7 755 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 ADAMTS10Q9H324 1103 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 ARHGEF3Q9NR81 526 aa20.67■□□□□ 0.9
CLN6-212ENST00000636020 DCDC2BA2VCK2 349 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 CARNS1A5YM72 827 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 SPTLC1O15269 473 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 ZC3H11AO75152 810 aaKnown RBP eCLIP20.66■□□□□ 0.9
CLN6-212ENST00000636020 ADRB1P08588 477 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 EIF4BP23588 611 aaKnown RBP20.66■□□□□ 0.9
CLN6-212ENST00000636020 KLRC2P26717 231 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
CLN6-212ENST00000636020 PDXDC2PQ6P474 469 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 CCDC60Q8IWA6 550 aaPredicted RBP20.66■□□□□ 0.9
CLN6-212ENST00000636020 METTL13Q8N6R0 699 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 RTKNQ9BST9 563 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 VN1R3Q9BXE9 311 aa20.66■□□□□ 0.9
CLN6-212ENST00000636020 AGO4Q9HCK5 861 aaKnown RBP20.66■□□□□ 0.9
CLN6-212ENST00000636020 WDR6Q9NNW5 1121 aaKnown RBP20.66■□□□□ 0.9
CLN6-212ENST00000636020 CDV3Q9UKY7 258 aaKnown RBP20.66■□□□□ 0.9
CLN6-212ENST00000636020 ATRXP46100 2492 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 DOCK8Q8NF50 2099 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 GALTP07902 379 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 CNPP09543 421 aaKnown RBP20.65■□□□□ 0.9
CLN6-212ENST00000636020 LMNB2Q03252 620 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 PJA1Q8NG27 643 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 MYADMQ96S97 322 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 MAP3K14Q99558 947 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 EMILIN2Q9BXX0 1053 aa20.65■□□□□ 0.9
CLN6-212ENST00000636020 ZNF302Q9NR11 478 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms