RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 ACAD11Q709F0 780 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 AFG1LQ8WV93 481 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 SCFD1Q8WVM8 642 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TTC17Q96AE7 1141 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 NAF1Q96HR8 494 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 MYL10Q9BUA6 226 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TJP2Q9UDY2 1190 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TRIM33Q9UPN9 1127 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 QRICH2Q9H0J4 1663 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TMEM131LA2VDJ0 1609 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TARSL2A2RTX5 802 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 HNRNPRO43390 633 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 RAD17O75943 681 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 GSNP06396 782 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 HIST1H2AGP0C0S8 130 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 STAG3L1P0CL83 205 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 SKIP12755 728 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 HIST1H2ADP20671 130 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 GCKP35557 465 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 KRT17Q04695 432 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 CCDC24Q8N4L8 307 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 H2AFJQ9BTM1 129 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 PSD3Q9NYI0 1048 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 HACD3Q9P035 362 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 SFMBT1Q9UHJ3 866 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 SPACA6W5XKT8 324 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 H3BRJ5 948 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 PGRMC1O00264 195 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 ASAP2O43150 1006 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 SORBS3O60504 671 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 CCT5P48643 541 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 EIF3BP55884 814 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 CAV1Q03135 178 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 ZNF235Q14590 738 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TRADDQ15628 312 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 KRBA2Q6ZNG9 492 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 TRIM59Q8IWR1 403 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 OXCT2Q9BYC2 517 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 MAN1C1Q9NR34 630 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 ABCF3Q9NUQ8 709 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 AKAP7Q9P0M2 348 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-218ENST00000635994 ANGPTL2Q9UKU9 493 aa6.75□□□□□ -1.33
GABRB3-218ENST00000635994 USP19O94966 1318 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 NPC1L1Q9UHC9 1359 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 KIF1AQ12756 1690 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L10C9JJH3 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 POC1B-GALNT4F8VUJ3 575 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 HOXA2O43364 376 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 TCF3P15923 654 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 CLCN1P35523 988 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 STAT3P40763 770 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 EFNA5P52803 228 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 CAPRIN1Q14444 709 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 MAPRE2Q15555 327 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 NAALADL2Q58DX5 795 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 ENOSF1Q7L5Y1 443 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 WDR75Q8IWA0 830 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 TEX9Q8N6V9 391 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 OSCP1Q8WVF1 389 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 EGFL8Q99944 293 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SYTL2Q9HCH5 934 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SH3GLB2Q9NR46 395 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 KIAA1468Q9P260 1216 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 BAIAP2L1Q9UHR4 511 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 NRXN1Q9ULB1 1477 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 E2F6O75461 281 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 IGHDP01880 384 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SDC4P31431 198 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SKOR1P84550 965 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 TAP1Q03518 808 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 KCNH2Q12809 1159 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 MTX1Q13505 466 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 KRT72Q14CN4 511 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 RCSD1Q6JBY9 416 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 TRIM72Q6ZMU5 477 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 CDKL3Q8IVW4 592 aaPredicted RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 MFN1Q8IWA4 741 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 DCP1BQ8IZD4 617 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 P2RX5Q93086 422 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 PPP1R13BQ96KQ4 1090 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 ACAD9Q9H845 621 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 DBNDD1Q9H9R9 158 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 INTS9Q9NV88 658 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 MIF4GDA9UHW6 222 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L15C9J2P7 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L13C9JLJ4 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L11C9JVI0 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L18D6R9N7 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L22D6RA61 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L17D6RBQ6 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L19D6RCP7 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L20D6RJB6 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 HSPA4LO95757 839 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 CYP2E1P05181 493 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms