RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 FAM47EQ6ZV65 393 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 ARHGAP24Q8N264 748 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 BBOF1Q8ND07 529 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 FBXO25Q8TCJ0 367 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 KIFAP3Q92845 792 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 VTI1AQ96AJ9 217 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 ROPN1BQ9BZX4 212 aaPredicted RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 ROPN1Q9HAT0 212 aaPredicted RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 SLC12A6Q9UHW9 1150 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 RASSF10A6NK89 507 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 PHF2O75151 1096 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 RAD23BP54727 409 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 MYL7Q01449 175 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 CYP4A11Q02928 519 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 DRAP1Q14919 205 aaPredicted RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 SFR1Q86XK3 245 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 CCT6BQ92526 530 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 MRRFQ96E11 262 aaKnown RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 BLOC1S4Q9NUP1 217 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 BTG4Q9NY30 223 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 TMOD4Q9NZQ9 345 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 SCOCQ9UIL1 159 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 MYH15Q9Y2K3 1946 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 C1orf167Q5SNV9 1468 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 TMEM120BA0PK00 339 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 SKIP12755 728 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 SOX5P35711 763 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 MSH2P43246 934 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 CRKLP46109 303 aaKnown RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 NPEPPSP55786 919 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 MAPK7Q13164 816 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 TNIP1Q15025 636 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 LLGL1Q15334 1064 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 EMC10Q5UCC4 262 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 ANKRD20A3Q5VUR7 823 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 CCDC62Q6P9F0 684 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 SLC30A9Q6PML9 568 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 BARGINQ6ZT62 677 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 LRRC37BQ96QE4 947 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 DDX23Q9BUQ8 820 aaKnown RBP9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 KIF9Q9HAQ2 790 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 ANAPC5Q9UJX4 755 aa9.04□□□□□ -0.96
SMARCA2-246ENST00000635739 A0A0A6YYK5 440 aaPredicted RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 EIF4E1BA6NMX2 242 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 MEIS1O00470 390 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PDXKO00764 312 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 DCTN3O75935 186 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 GGPS1O95749 300 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 TMEM253P0C7T8 217 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 GAP43P17677 238 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PTENP60484 403 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PLCB3Q01970 1234 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 ZNF449Q6P9G9 518 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 TRMT10CQ7L0Y3 403 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 USP37Q86T82 979 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 FAM178BQ8IXR5 827 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 CEP120Q8N960 986 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 IQCGQ9H095 443 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 CNOT8Q9UFF9 292 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 RABGAP1Q9Y3P9 1069 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 LAMA4Q16363 1823 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 ESYT2A0FGR8 921 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 H0Y3Z8 333 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 MGRN1O60291 552 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PDHA1P08559 390 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 BTDP43251 543 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 BAG6P46379 1132 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 SNX1Q13596 522 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 TEX9Q8N6V9 391 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 SH3RF3Q8TEJ3 882 aaPredicted RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 NUDCD1Q96RS6 583 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 EHMT1Q9H9B1 1298 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PNMA6FA0A0J9YX94 578 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 C5orf60A6NFR6 353 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PAEPP09466 180 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 COPB2P35606 906 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 RWDD2BP57060 319 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 RIPK1Q13546 671 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 ERFEQ4G0M1 354 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PHLDB3Q6NSJ2 640 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 SHISA4Q96DD7 197 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 PNMA5Q96PV4 448 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 SMC6Q96SB8 1091 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 DHX36Q9H2U1 1008 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 STOML1Q9UBI4 398 aa9.03□□□□□ -0.96
SMARCA2-246ENST00000635739 DISP2A7MBM2 1401 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 BTNL10A8MVZ5 291 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 C6orf229H3BNL8 230 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 TLR2O60603 784 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 PPFIA2O75334 1257 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 LMNAP02545 664 aaKnown RBP9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 GPC5P78333 572 aa9.02□□□□□ -0.96
SMARCA2-246ENST00000635739 RNASELQ05823 741 aaKnown RBP9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms