RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 ALG13Q9NP73 1137 aaKnown RBP17.47■□□□□ 0.39
LINC00339-209ENST00000635450 CD320Q9NPF0 282 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 NRBP2Q9NSY0 501 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 NOL7Q9UMY1 257 aaKnown RBP17.47■□□□□ 0.39
LINC00339-209ENST00000635450 H3BQV1 296 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 IL9P15248 144 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 SARSP49591 514 aaKnown RBP17.46■□□□□ 0.39
LINC00339-209ENST00000635450 NLRP11P59045 1033 aaKnown RBP17.46■□□□□ 0.39
LINC00339-209ENST00000635450 PPP2R5CQ13362 524 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 PTPROQ16827 1216 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 FAM102BQ5T8I3 360 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 NOSTRINQ8IVI9 506 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 CMTR2Q8IYT2 770 aaKnown RBP17.46■□□□□ 0.39
LINC00339-209ENST00000635450 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.46■□□□□ 0.39
LINC00339-209ENST00000635450 CEP89Q96ST8 783 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 C11orf84Q9BUA3 381 aaPredicted RBP17.46■□□□□ 0.39
LINC00339-209ENST00000635450 ADAMTS10Q9H324 1103 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 NSUN3Q9H649 340 aaKnown RBP17.46■□□□□ 0.39
LINC00339-209ENST00000635450 AKT3Q9Y243 479 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 PCDHGC5Q9Y5F6 944 aa17.46■□□□□ 0.39
LINC00339-209ENST00000635450 C9IYK1 514 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 EML1O00423 815 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC00339-209ENST00000635450 ITGB1P05556 798 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 FGFR4P22455 802 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 CRYBB1P53674 252 aaPredicted RBP17.45■□□□□ 0.38
LINC00339-209ENST00000635450 DSC3Q14574 896 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 COL19A1Q14993 1142 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 TARBP2Q15633 366 aaKnown RBP17.45■□□□□ 0.38
LINC00339-209ENST00000635450 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 HAS1Q92839 578 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 SEPT9Q9UHD8 586 aaPredicted RBP17.45■□□□□ 0.38
LINC00339-209ENST00000635450 RAPGEFL1Q9UHV5 662 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 VAV3Q9UKW4 847 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
LINC00339-209ENST00000635450 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 CSDE1O75534 798 aaKnown RBP17.44■□□□□ 0.38
LINC00339-209ENST00000635450 FGFR1P11362 822 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 MCM7P33993 719 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 TRAPPC10P48553 1259 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 DLX2Q07687 328 aaPredicted RBP17.44■□□□□ 0.38
LINC00339-209ENST00000635450 HYAL1Q12794 435 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 ORC2Q13416 577 aaPredicted RBP17.44■□□□□ 0.38
LINC00339-209ENST00000635450 LEXMQ3ZCV2 418 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 MTERF2Q49AM1 385 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 PLA2G4FQ68DD2 849 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 NCAPH2Q6IBW4 605 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 NEK9Q8TD19 979 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 RGS18Q9NS28 235 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
LINC00339-209ENST00000635450 PLAGL2Q9UPG8 496 aa17.44■□□□□ 0.38
LINC00339-209ENST00000635450 WNT7AO00755 349 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 LINC01565O15544 149 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 RB1P06400 928 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 STAG3L1P0CL83 205 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00339-209ENST00000635450 IRS1P35568 1242 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 LTBRP36941 435 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 TXKP42681 527 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 GPC3P51654 580 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 PSMC5P62195 406 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 CUL4AQ13619 759 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 EPHA7Q15375 998 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 TTC38Q5R3I4 469 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 LARP1BQ659C4 914 aaKnown RBP17.43■□□□□ 0.38
LINC00339-209ENST00000635450 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 ADGRD2Q7Z7M1 963 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 KLHL23Q8NBE8 558 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 LRFN2Q9ULH4 789 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 RWDD3Q9Y3V2 267 aa17.43■□□□□ 0.38
LINC00339-209ENST00000635450 TBKBP1A7MCY6 615 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 MAGEB2O15479 319 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 TBX10O75333 385 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
LINC00339-209ENST00000635450 QARSP47897 775 aaKnown RBP17.42■□□□□ 0.38
LINC00339-209ENST00000635450 TBC1D8BQ0IIM8 1120 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 ZNF174Q15697 407 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 CLUL1Q15846 466 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 XKR3Q5GH77 459 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
LINC00339-209ENST00000635450 SPPL3Q8TCT6 385 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 PABPC5Q96DU9 382 aaKnown RBP17.42■□□□□ 0.38
LINC00339-209ENST00000635450 TTC12Q9H892 705 aaPredicted RBP17.42■□□□□ 0.38
LINC00339-209ENST00000635450 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
LINC00339-209ENST00000635450 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
LINC00339-209ENST00000635450 GPR182O15218 404 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 TMOD1P28289 359 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 PTCRAQ6ISU1 281 aaPredicted RBP17.41■□□□□ 0.38
LINC00339-209ENST00000635450 SLC24A5Q71RS6 500 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 ANO5Q75V66 913 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 PLVAPQ9BX97 442 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 LMAN2LQ9H0V9 348 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 EPHX3Q9H6B9 360 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 PCDHB7Q9Y5E2 793 aa17.41■□□□□ 0.38
LINC00339-209ENST00000635450 IGKV6-21A0A0C4DH24 114 aa17.4■□□□□ 0.38
LINC00339-209ENST00000635450 GRXCR2A6NFK2 248 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms