RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 DARSP14868 501 aaKnown RBP17.52■□□□□ 0.39
LINC00339-207ENST00000634712 TOB1P50616 345 aaPredicted RBP17.52■□□□□ 0.39
LINC00339-207ENST00000634712 ERVK-21P61565 698 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 PTGDRQ13258 359 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 NPAS4Q8IUM7 802 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 FIBCD1Q8N539 461 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.39
LINC00339-207ENST00000634712 SLC17A8Q8NDX2 589 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 LINC01599Q8WXQ3 324 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 PPM1EQ8WY54 764 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 DHX33Q9H6R0 707 aaKnown RBP17.52■□□□□ 0.39
LINC00339-207ENST00000634712 TUFT1Q9NNX1 390 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.39
LINC00339-207ENST00000634712 ANKEF1Q9NU02 776 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 PCDHB7Q9Y5E2 793 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 PCDHB6Q9Y5E3 794 aa17.52■□□□□ 0.39
LINC00339-207ENST00000634712 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 COL6A3P12111 3177 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 A0A087WZ62 844 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 LAD1O00515 517 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC00339-207ENST00000634712 PDCP20941 246 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 SARSP49591 514 aaKnown RBP17.51■□□□□ 0.39
LINC00339-207ENST00000634712 ADGRE1Q14246 886 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 EMC2Q15006 297 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 SLC24A5Q71RS6 500 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 ZNF410Q86VK4 478 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-207ENST00000634712 PSPC1Q8WXF1 523 aaKnown RBP17.51■□□□□ 0.39
LINC00339-207ENST00000634712 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 NLRP4Q96MN2 994 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 SAMD11Q96NU1 681 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 MTRQ99707 1265 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 FDXACB1Q9BRP7 624 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-207ENST00000634712 POLR3CQ9BUI4 534 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-207ENST00000634712 RGS18Q9NS28 235 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 STK24Q9Y6E0 443 aa17.51■□□□□ 0.39
LINC00339-207ENST00000634712 ASAP2O43150 1006 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00339-207ENST00000634712 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00339-207ENST00000634712 TTC3P53804 2025 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 BTG3Q14201 252 aaPredicted RBP17.5■□□□□ 0.39
LINC00339-207ENST00000634712 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 CATSPER3Q86XQ3 398 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 MICALL1Q8N3F8 863 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 PRPF31Q8WWY3 499 aaKnown RBP17.5■□□□□ 0.39
LINC00339-207ENST00000634712 NACC1Q96RE7 527 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 LRWD1Q9UFC0 647 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 COL4A3BPQ9Y5P4 624 aa17.5■□□□□ 0.39
LINC00339-207ENST00000634712 EPOPA6NHQ4 379 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 K7ELQ4 463 aaPredicted RBP17.49■□□□□ 0.39
LINC00339-207ENST00000634712 MGEA5O60502 916 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 DGAT1O75907 488 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 DGKIO75912 1065 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 SRGAP2CP0DJJ0 459 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 FGFR4P22455 802 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 RPA1P27694 616 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 PDIA5Q14554 519 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 CCDC85BQ15834 202 aaPredicted RBP17.49■□□□□ 0.39
LINC00339-207ENST00000634712 DTHD1Q6ZMT9 781 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 KSR1Q8IVT5 923 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 C17orf80Q9BSJ5 609 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 ATP6V0A4Q9HBG4 840 aa17.49■□□□□ 0.39
LINC00339-207ENST00000634712 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.49■□□□□ 0.39
LINC00339-207ENST00000634712 ADGRA3Q8IWK6 1321 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 A0A087WWV3 80 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 VPS37CA5D8V6 355 aaPredicted RBP17.48■□□□□ 0.39
LINC00339-207ENST00000634712 MED24O75448 989 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 CSDE1O75534 798 aaKnown RBP17.48■□□□□ 0.39
LINC00339-207ENST00000634712 SPATA31C1P0DKV0 1188 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 CCT6AP40227 531 aaKnown RBP17.48■□□□□ 0.39
LINC00339-207ENST00000634712 RARRES1P49788 294 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 LAMTOR4Q0VGL1 99 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 GRB10Q13322 594 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 MXD4Q14582 209 aaPredicted RBP17.48■□□□□ 0.39
LINC00339-207ENST00000634712 TMEM192Q8IY95 271 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 INTS4Q96HW7 963 aaKnown RBP17.48■□□□□ 0.39
LINC00339-207ENST00000634712 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 RWDD3Q9Y3V2 267 aa17.48■□□□□ 0.39
LINC00339-207ENST00000634712 C9IYK1 514 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 MUTP22033 750 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 PRPHP41219 470 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 DSC3Q14574 896 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 EPC2Q52LR7 807 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 KRT79Q5XKE5 535 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 CATSPER4Q7RTX7 472 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 GDPD5Q8WTR4 605 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 ZNF689Q96CS4 500 aaPredicted RBP17.47■□□□□ 0.39
LINC00339-207ENST00000634712 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 CHD7Q9P2D1 2997 aa17.47■□□□□ 0.39
LINC00339-207ENST00000634712 DBR1Q9UK59 544 aaKnown RBP17.47■□□□□ 0.39
LINC00339-207ENST00000634712 ARHGEF35A5YM69 484 aa17.46■□□□□ 0.39
LINC00339-207ENST00000634712 CTNNB1P35222 781 aa17.46■□□□□ 0.39
LINC00339-207ENST00000634712 TFDP1Q14186 410 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms