RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 EFR3AQ14156 821 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 RFX6Q8HWS3 928 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 WBP11Q9Y2W2 641 aaKnown RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 CCDC162PA2VCL2 907 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 ATP2B4P23634 1241 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 SLC7A5Q01650 507 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 C2orf54Q08AI8 447 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 SFSWAPQ12872 951 aaKnown RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 CUL1Q13616 776 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 SGSM1Q2NKQ1 1148 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 BLIDQ8IZY5 108 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 C19orf18Q8NEA5 215 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 TESK2Q96S53 571 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 EPN1Q9Y6I3 576 aaPredicted RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 TAC1P20366 129 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 RNF14Q9UBS8 474 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 AP3B1O00203 1094 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 KPNA4O00629 521 aaPredicted RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 PMS2P54278 862 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 HIC1Q14526 733 aa12.09□□□□□ -0.47
SRSF4-208ENST00000634348 EPM2AIP1Q7L775 607 aaPredicted RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 IBTKQ9P2D0 1353 aaPredicted RBP12.09□□□□□ -0.47
SRSF4-208ENST00000634348 KLRF2D3W0D1 207 aa12.08□□□□□ -0.47
SRSF4-208ENST00000634348 PSMA3P25788 255 aa12.08□□□□□ -0.47
SRSF4-208ENST00000634348 RSBN1Q5VWQ0 802 aaPredicted RBP12.08□□□□□ -0.47
SRSF4-208ENST00000634348 SLC35F6Q8N357 371 aa12.08□□□□□ -0.47
SRSF4-208ENST00000634348 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.47
SRSF4-208ENST00000634348 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.47
SRSF4-208ENST00000634348 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.47
SRSF4-208ENST00000634348 SASH1O94885 1247 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 INPP5AQ14642 412 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 MICU2Q8IYU8 434 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 BCS1LQ9Y276 419 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 PABPC4Q13310 644 aaKnown RBP eCLIP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 PYCARDQ9ULZ3 195 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 MEIS1O00470 390 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 IYDQ6PHW0 289 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 EEPD1Q7L9B9 569 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 RRM2BQ7LG56 351 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 C18orf25Q96B23 403 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 ECEL1O95672 775 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 CASP14P31944 242 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 NUP107P57740 925 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 THOC5Q13769 683 aaKnown RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 RUBCNLQ9H714 662 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 IDH3BO43837 385 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 SERPINH1P50454 418 aaKnown RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 EMBQ6PCB8 327 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 EXT2Q93063 718 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 CCDC28BQ9BUN5 200 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 GUCA1CO95843 209 aa12.08□□□□□ -0.48
SRSF4-208ENST00000634348 YWHABP31946 246 aaKnown RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 ATXN3P54252 364 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 AARS2Q5JTZ9 985 aaKnown RBP12.08□□□□□ -0.48
SRSF4-208ENST00000634348 A6NJR5 290 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 TK2O00142 265 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 RABGAP1LQ5R372 815 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 RFX8Q6ZV50 586 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 DEPDC7Q96QD5 511 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 POTECB2RU33 542 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 SCP2P22307 547 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 BTN3A2P78410 334 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 ADALQ6DHV7 355 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 CENPUQ71F23 418 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 MRPL39Q9NYK5 338 aaKnown RBP12.07□□□□□ -0.48
SRSF4-208ENST00000634348 SEPT9Q9UHD8 586 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-208ENST00000634348 ZBTB22O15209 634 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 KCNA2P16389 499 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 CDC25BP30305 580 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 DMP1Q13316 513 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-208ENST00000634348 GCKRQ14397 625 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 SFR1Q86XK3 245 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 RASSF5Q8WWW0 418 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 A0A0B4J269 797 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 PGM1P36871 562 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 TUBB3Q13509 450 aa12.07□□□□□ -0.48
SRSF4-208ENST00000634348 TUBA3CQ13748 450 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms