RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
GPC3-204ENST00000631057 ZBTB9Q96C00 473 aa8.8□□□□□ -1
GPC3-204ENST00000631057 BORCS6Q96GS4 357 aa8.8□□□□□ -1
GPC3-204ENST00000631057 DYDC2Q96IM9 177 aa8.8□□□□□ -1
GPC3-204ENST00000631057 PRMT6Q96LA8 375 aaPredicted RBP8.8□□□□□ -1
GPC3-204ENST00000631057 RANBP17Q9H2T7 1088 aaKnown RBP8.8□□□□□ -1
GPC3-204ENST00000631057 ZBTB21Q9ULJ3 1066 aa8.8□□□□□ -1
GPC3-204ENST00000631057 NENFQ9UMX5 172 aa8.8□□□□□ -1
GPC3-204ENST00000631057 TMX2Q9Y320 296 aa8.8□□□□□ -1
GPC3-204ENST00000631057 ZMYM2Q9UBW7 1377 aa8.8□□□□□ -1
GPC3-204ENST00000631057 A6NNZ2 444 aa8.79□□□□□ -1
GPC3-204ENST00000631057 TULP2O00295 520 aa8.79□□□□□ -1
GPC3-204ENST00000631057 DPYSL4O14531 572 aa8.79□□□□□ -1
GPC3-204ENST00000631057 KCNK3O14649 394 aa8.79□□□□□ -1
GPC3-204ENST00000631057 TGFB1I1O43294 461 aa8.79□□□□□ -1
GPC3-204ENST00000631057 PPIP5K2O43314 1243 aa8.79□□□□□ -1
GPC3-204ENST00000631057 CHMP2AO43633 222 aa8.79□□□□□ -1
GPC3-204ENST00000631057 SHOX2O60902 331 aaPredicted RBP8.79□□□□□ -1
GPC3-204ENST00000631057 VIL1P09327 827 aaKnown RBP8.79□□□□□ -1
GPC3-204ENST00000631057 CCDC172P0C7W6 258 aa8.79□□□□□ -1
GPC3-204ENST00000631057 LMNB1P20700 586 aa8.79□□□□□ -1
GPC3-204ENST00000631057 NMT1P30419 496 aaKnown RBP8.79□□□□□ -1
GPC3-204ENST00000631057 DNA2P51530 1060 aa8.79□□□□□ -1
GPC3-204ENST00000631057 GUCY2DQ02846 1103 aa8.79□□□□□ -1
GPC3-204ENST00000631057 PPP2R5AQ15172 486 aa8.79□□□□□ -1
GPC3-204ENST00000631057 TUBB8Q3ZCM7 444 aa8.79□□□□□ -1
GPC3-204ENST00000631057 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
GPC3-204ENST00000631057 CCDC174Q6PII3 467 aa8.79□□□□□ -1
GPC3-204ENST00000631057 FAM178BQ8IXR5 827 aa8.79□□□□□ -1
GPC3-204ENST00000631057 LRRC57Q8N9N7 239 aa8.79□□□□□ -1
GPC3-204ENST00000631057 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
GPC3-204ENST00000631057 RBM46Q8TBY0 533 aaKnown RBP8.79□□□□□ -1
GPC3-204ENST00000631057 ACTRT1Q8TDG2 376 aa8.79□□□□□ -1
GPC3-204ENST00000631057 PIGOQ8TEQ8 1089 aa8.79□□□□□ -1
GPC3-204ENST00000631057 FAM151AQ8WW52 585 aa8.79□□□□□ -1
GPC3-204ENST00000631057 RIN2Q8WYP3 895 aaPredicted RBP8.79□□□□□ -1
GPC3-204ENST00000631057 CALR3Q96L12 384 aaKnown RBP8.79□□□□□ -1
GPC3-204ENST00000631057 KRT12Q99456 494 aa8.79□□□□□ -1
GPC3-204ENST00000631057 TEKT3Q9BXF9 490 aa8.79□□□□□ -1
GPC3-204ENST00000631057 TMEM59LQ9UK28 342 aa8.79□□□□□ -1
GPC3-204ENST00000631057 FRMD4BQ9Y2L6 1034 aa8.79□□□□□ -1
GPC3-204ENST00000631057 NCANO14594 1321 aa8.79□□□□□ -1
GPC3-204ENST00000631057 ARHGEF35A5YM69 484 aa8.78□□□□□ -1
GPC3-204ENST00000631057 TCP10L2B9ZVM9 353 aa8.78□□□□□ -1
GPC3-204ENST00000631057 PGRMC1O00264 195 aaKnown RBP8.78□□□□□ -1
GPC3-204ENST00000631057 PPFIA4O75335 1185 aa8.78□□□□□ -1
GPC3-204ENST00000631057 GLI1P08151 1106 aa8.78□□□□□ -1
GPC3-204ENST00000631057 RFX1P22670 979 aa8.78□□□□□ -1
GPC3-204ENST00000631057 GUCY2CP25092 1073 aa8.78□□□□□ -1
GPC3-204ENST00000631057 SOX5P35711 763 aa8.78□□□□□ -1
GPC3-204ENST00000631057 ECE1P42892 770 aa8.78□□□□□ -1
GPC3-204ENST00000631057 FMO5P49326 533 aa8.78□□□□□ -1
GPC3-204ENST00000631057 MRPS25P82663 173 aaKnown RBP8.78□□□□□ -1
GPC3-204ENST00000631057 KCNA1Q09470 495 aa8.78□□□□□ -1
GPC3-204ENST00000631057 MYBPC2Q14324 1141 aa8.78□□□□□ -1
GPC3-204ENST00000631057 PPP1R15BQ5SWA1 713 aa8.78□□□□□ -1
GPC3-204ENST00000631057 CFAP58Q5T655 872 aa8.78□□□□□ -1
GPC3-204ENST00000631057 LRRC31Q6UY01 552 aa8.78□□□□□ -1
GPC3-204ENST00000631057 ZNF720Q7Z2F6 126 aa8.78□□□□□ -1
GPC3-204ENST00000631057 SLFN11Q7Z7L1 901 aa8.78□□□□□ -1
GPC3-204ENST00000631057 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
GPC3-204ENST00000631057 ACER1Q8TDN7 264 aa8.78□□□□□ -1
GPC3-204ENST00000631057 C7orf43Q8WVR3 580 aa8.78□□□□□ -1
GPC3-204ENST00000631057 RIT2Q99578 217 aa8.78□□□□□ -1
GPC3-204ENST00000631057 HINFPQ9BQA5 517 aa8.78□□□□□ -1
GPC3-204ENST00000631057 ZNF577Q9BSK1 485 aa8.78□□□□□ -1
GPC3-204ENST00000631057 STK33Q9BYT3 514 aa8.78□□□□□ -1
GPC3-204ENST00000631057 VCPKMTQ9H867 229 aa8.78□□□□□ -1
GPC3-204ENST00000631057 EPB41L5Q9HCM4 733 aa8.78□□□□□ -1
GPC3-204ENST00000631057 DMAC2Q9NW81 257 aa8.78□□□□□ -1
GPC3-204ENST00000631057 SUCLA2Q9P2R7 463 aaPredicted RBP8.78□□□□□ -1
GPC3-204ENST00000631057 ZNF70Q9UC06 446 aaPredicted RBP8.78□□□□□ -1
GPC3-204ENST00000631057 FEM1BQ9UK73 627 aa8.78□□□□□ -1
GPC3-204ENST00000631057 NFU1Q9UMS0 254 aa8.78□□□□□ -1
GPC3-204ENST00000631057 SFI1A8K8P3 1242 aa8.78□□□□□ -1
GPC3-204ENST00000631057 YDJCA8MPS7 323 aa8.78□□□□□ -1
GPC3-204ENST00000631057 F8VZ95 297 aa8.78□□□□□ -1
GPC3-204ENST00000631057 CCDC188H7C350 402 aa8.78□□□□□ -1
GPC3-204ENST00000631057 DDX3XO00571 662 aaKnown RBP eCLIP8.78□□□□□ -11e-323■■□□□ 12.1
GPC3-204ENST00000631057 CEP104O60308 925 aa8.78□□□□□ -1
GPC3-204ENST00000631057 TBC1D12O60347 775 aa8.78□□□□□ -1
GPC3-204ENST00000631057 CHRNA5P30532 468 aa8.78□□□□□ -1
GPC3-204ENST00000631057 CARSP49589 748 aaKnown RBP8.78□□□□□ -1
GPC3-204ENST00000631057 CYP2J2P51589 502 aa8.78□□□□□ -1
GPC3-204ENST00000631057 MYL7Q01449 175 aa8.78□□□□□ -1
GPC3-204ENST00000631057 CUL1Q13616 776 aa8.78□□□□□ -1
GPC3-204ENST00000631057 ALCAMQ13740 583 aa8.78□□□□□ -1
GPC3-204ENST00000631057 TNIP1Q15025 636 aa8.78□□□□□ -1
GPC3-204ENST00000631057 DLGAP5Q15398 846 aa8.78□□□□□ -1
GPC3-204ENST00000631057 KIAA1755Q5JYT7 1200 aa8.78□□□□□ -1
GPC3-204ENST00000631057 ODR4Q5SWX8 454 aa8.78□□□□□ -1
GPC3-204ENST00000631057 FKBP1CQ5VVH2 108 aa8.78□□□□□ -1
GPC3-204ENST00000631057 RSBN1LQ6PCB5 846 aaPredicted RBP8.78□□□□□ -1
GPC3-204ENST00000631057 PEX26Q7Z412 305 aa8.78□□□□□ -1
GPC3-204ENST00000631057 SLC9A9Q8IVB4 645 aa8.78□□□□□ -1
GPC3-204ENST00000631057 U2AF1L4Q8WU68 220 aaKnown RBP8.78□□□□□ -1
GPC3-204ENST00000631057 SCFD2Q8WU76 684 aa8.78□□□□□ -1
GPC3-204ENST00000631057 CASKIN2Q8WXE0 1202 aa8.78□□□□□ -1
GPC3-204ENST00000631057 IFT81Q8WYA0 676 aa8.78□□□□□ -1
GPC3-204ENST00000631057 VTI1AQ96AJ9 217 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms