RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 BDP1A6H8Y1 2624 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 DDX11L8A8MPP1 907 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 BTBD18B2RXH4 712 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 MAFO75444 373 aaPredicted RBP15.35■□□□□ 0.05
TREX1-206ENST00000629913 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
TREX1-206ENST00000629913 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
TREX1-206ENST00000629913 FOSBP53539 338 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 TRIM29Q14134 588 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 COL19A1Q14993 1142 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 TCEAL5Q5H9L2 206 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 PLA2G4FQ68DD2 849 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 SLFN12Q8IYM2 578 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 NLRP7Q8WX94 980 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 SCLT1Q96NL6 688 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 KIF2CQ99661 725 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 ELAC1Q9H777 363 aaKnown RBP15.35■□□□□ 0.05
TREX1-206ENST00000629913 TMEM161AQ9NX61 479 aa15.35■□□□□ 0.05
TREX1-206ENST00000629913 WRAP73Q9P2S5 460 aaPredicted RBP15.35■□□□□ 0.05
TREX1-206ENST00000629913 MARCH6O60337 910 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
TREX1-206ENST00000629913 DNM2P50570 870 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 CDC42EP1Q00587 391 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 EPHA7Q15375 998 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 NAALADL2Q58DX5 795 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 FAM102BQ5T8I3 360 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 LXNQ9BS40 222 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 ATP6V0A4Q9HBG4 840 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 CYP26B1Q9NR63 512 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 PLAGL2Q9UPG8 496 aa15.34■□□□□ 0.05
TREX1-206ENST00000629913 FNDC1Q4ZHG4 1894 aaPredicted RBP15.33■□□□□ 0.05
TREX1-206ENST00000629913 TCF20Q9UGU0 1960 aaKnown RBP15.33■□□□□ 0.05
TREX1-206ENST00000629913 TBKBP1A7MCY6 615 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 WNT7AO00755 349 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 ITGB1P05556 798 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 FGFR1P11362 822 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 KCNA5P22460 613 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 NPEPPSP55786 919 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 CAMK1Q14012 370 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 LEXMQ3ZCV2 418 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 NCAPH2Q6IBW4 605 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 CCDC83Q8IWF9 413 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 C4orf19Q8IY42 314 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 KLHL23Q8NBE8 558 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 PABPC5Q96DU9 382 aaKnown RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 JPH2Q9BR39 696 aaPredicted RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 LLPHQ9BRT6 129 aaKnown RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 GCOM2Q9BZD3 368 aaPredicted RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 SUCLA2Q9P2R7 463 aaPredicted RBP15.33■□□□□ 0.04
TREX1-206ENST00000629913 PPME1Q9Y570 386 aa15.33■□□□□ 0.04
TREX1-206ENST00000629913 A0A087WZ62 844 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 NEMFO60524 1076 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 CSDE1O75534 798 aaKnown RBP15.32■□□□□ 0.04
TREX1-206ENST00000629913 FGFR4P22455 802 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 DNAJB1P25685 340 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 YWHABP31946 246 aaKnown RBP15.32■□□□□ 0.04
TREX1-206ENST00000629913 CALCRLQ16602 461 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
TREX1-206ENST00000629913 SPPL3Q8TCT6 385 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 NEK9Q8TD19 979 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 SLC7A3Q8WY07 619 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 DYDC2Q96IM9 177 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 CEP170P1Q96L14 293 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 FDXACB1Q9BRP7 624 aaPredicted RBP15.32■□□□□ 0.04
TREX1-206ENST00000629913 DHX33Q9H6R0 707 aaKnown RBP15.32■□□□□ 0.04
TREX1-206ENST00000629913 RNF19AQ9NV58 838 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 RGL1Q9NZL6 768 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 HCSTQ9UBK5 93 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 MYO7AQ13402 2215 aa15.32■□□□□ 0.04
TREX1-206ENST00000629913 HOXA2O43364 376 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
TREX1-206ENST00000629913 RFC5P40937 340 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 RBM25P49756 843 aaKnown RBP15.31■□□□□ 0.04
TREX1-206ENST00000629913 POLGP54098 1239 aaPredicted RBP15.31■□□□□ 0.04
TREX1-206ENST00000629913 CYP4A11Q02928 519 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 RHPN2Q8IUC4 686 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.31■□□□□ 0.04
TREX1-206ENST00000629913 ZSCAN31Q96LW9 406 aaPredicted RBP15.31■□□□□ 0.04
TREX1-206ENST00000629913 MTMR9Q96QG7 549 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 TMEM117Q9H0C3 514 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 SH2B1Q9NRF2 756 aaPredicted RBP15.31■□□□□ 0.04
TREX1-206ENST00000629913 PCDHA12Q9UN75 941 aa15.31■□□□□ 0.04
TREX1-206ENST00000629913 A0A0U1RQF3 1178 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 NCK2O43639 380 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 SLITRK3O94933 977 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 CSPG5O95196 566 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 ATF7P17544 494 aaPredicted RBP15.3■□□□□ 0.04
TREX1-206ENST00000629913 HMGN5P82970 282 aaKnown RBP15.3■□□□□ 0.04
TREX1-206ENST00000629913 GUCY1B3Q02153 619 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 HYAL1Q12794 435 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 CTTNQ14247 550 aaKnown RBP15.3■□□□□ 0.04
TREX1-206ENST00000629913 SAFBQ15424 915 aaKnown RBP eCLIP15.3■□□□□ 0.04
TREX1-206ENST00000629913 CTC1Q2NKJ3 1217 aa15.3■□□□□ 0.04
TREX1-206ENST00000629913 ARID2Q68CP9 1835 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms