RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 TECP42680 631 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 RARRES1P49788 294 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 HTRA4P83105 476 aaPredicted RBP12.43□□□□□ -0.42
DDX41-219ENST00000629036 TFF2Q03403 129 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 TBC1D8BQ0IIM8 1120 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 IKBKEQ14164 716 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 DSC3Q14574 896 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 IER5Q5VY09 327 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 ALYREFQ86V81 257 aaKnown RBP12.43□□□□□ -0.42
DDX41-219ENST00000629036 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
DDX41-219ENST00000629036 SEPT8Q92599 483 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 APBB2Q92870 758 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 PPP1R16BQ96T49 567 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 OSMRQ99650 979 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 POLR3CQ9BUI4 534 aaPredicted RBP12.43□□□□□ -0.42
DDX41-219ENST00000629036 TUFT1Q9NNX1 390 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 PADI3Q9ULW8 664 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 PIEZO1Q92508 2521 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 TRIP11Q15643 1979 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 H3BQV1 296 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 LAD1O00515 517 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 RPA1P27694 616 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 KCNQ1P51787 676 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 CRYBB1P53674 252 aaPredicted RBP12.42□□□□□ -0.42
DDX41-219ENST00000629036 GNL2Q13823 731 aaKnown RBP12.42□□□□□ -0.42
DDX41-219ENST00000629036 RAB30Q15771 203 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 TMEM266Q2M3C6 531 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 FERMT3Q86UX7 667 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 METTL13Q8N6R0 699 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 LRRC15Q8TF66 581 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 TSPYL2Q9H2G4 693 aaPredicted RBP12.42□□□□□ -0.42
DDX41-219ENST00000629036 NKX2-4Q9H2Z4 354 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 ANKEF1Q9NU02 776 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
DDX41-219ENST00000629036 A0A087WWV3 80 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 EPOPA6NHQ4 379 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 ENPP3O14638 875 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 DKC1O60832 514 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDX41-219ENST00000629036 CA3P07451 260 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 NLRP11P59045 1033 aaKnown RBP12.41□□□□□ -0.42
DDX41-219ENST00000629036 TAP1Q03518 808 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 GRIN1Q05586 938 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 EMC2Q15006 297 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 PTPAQ15257 358 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 KCNK18Q7Z418 384 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 TPH2Q8IWU9 490 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 PIGOQ8TEQ8 1089 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 TOP1MTQ969P6 601 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 ZNF668Q96K58 619 aaPredicted RBP12.41□□□□□ -0.42
DDX41-219ENST00000629036 CEP170P1Q96L14 293 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
DDX41-219ENST00000629036 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
DDX41-219ENST00000629036 MARCH6O60337 910 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 BMP1P13497 986 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 DARSP14868 501 aaKnown RBP12.4□□□□□ -0.42
DDX41-219ENST00000629036 PDCP20941 246 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 RFC5P40937 340 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 KCNJ6P48051 423 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 PAK2Q13177 524 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 PKP1Q13835 747 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 PDIA5Q14554 519 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 SKIV2LQ15477 1246 aaKnown RBP12.4□□□□□ -0.42
DDX41-219ENST00000629036 TMEM31Q5JXX7 168 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 HYIQ5T013 277 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 TMEM143Q96AN5 459 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 DBR1Q9UK59 544 aaKnown RBP12.4□□□□□ -0.42
DDX41-219ENST00000629036 ST3GAL5Q9UNP4 418 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 AKT3Q9Y243 479 aa12.4□□□□□ -0.42
DDX41-219ENST00000629036 TDRD15B5MCY1 1934 aaKnown RBP12.4□□□□□ -0.42
DDX41-219ENST00000629036 PDCD11Q14690 1871 aaKnown RBP12.4□□□□□ -0.42
DDX41-219ENST00000629036 A0A087WZ62 844 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 C9IYK1 514 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 M0QZ92 97 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 STX6O43752 255 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 XRCC6P12956 609 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDX41-219ENST00000629036 MUTP22033 750 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 EIF4BP23588 611 aaKnown RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 CDC25AP30304 524 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 ARL2P36404 184 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 ZNF410Q86VK4 478 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
DDX41-219ENST00000629036 PNMA5Q96PV4 448 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 RAD9AQ99638 391 aa12.39□□□□□ -0.43
DDX41-219ENST00000629036 FDXACB1Q9BRP7 624 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms