RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 EYA4O95677 639 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 ITGB3BPQ13352 177 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 APBB1IPQ7Z5R6 666 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 TRIB2Q92519 343 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 HAS1Q92839 578 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 MTG1Q9BT17 334 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 ATP11BQ9Y2G3 1177 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 SYNGAP1Q96PV0 1343 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 KRT13P13646 458 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 SPECC1LQ69YQ0 1117 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 CTNND2Q9UQB3 1225 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 PQBP1O60828 265 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 LGALS2P05162 132 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 SMPD1P17405 629 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 FECHP22830 423 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 SYT10Q6XYQ8 523 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 CATSPER4Q7RTX7 472 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 ADPGKQ9BRR6 497 aa13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 POLR3FQ9H1D9 316 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-207ENST00000628646 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 SPATA1Q5VX52 437 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 SIPA1L1O43166 1804 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 TMEM150BA6NC51 233 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 K7ERI5 159 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 PHACTR2O75167 634 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 CYP3A7P24462 503 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 KMT5BQ4FZB7 885 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 CCDC60Q8IWA6 550 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 SAGE1Q9NXZ1 904 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 C17orf102A2RUQ5 167 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 DGAT1O75907 488 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 MYL1P05976 194 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 EFCAB12Q6NXP0 572 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 TRAPPC12Q8WVT3 735 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 EEF2KMTQ96G04 330 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 SUCLA2Q9P2R7 463 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
SYNGAP1-207ENST00000628646 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 H0YCG3 227 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 EDIL3O43854 480 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 KPNA6O60684 536 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 CAPN15O75808 1086 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 PSMD10O75832 226 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 INSRRP14616 1297 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 CA8P35219 290 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 TRIM32Q13049 653 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 POLR3CQ9BUI4 534 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 EXOC3O60645 756 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 DUSP11O75319 330 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 GAP43P17677 238 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 CYP2J2P51589 502 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 MFSD10Q14728 455 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 RNF149Q8NC42 400 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 MAF1Q9H063 256 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 MTMR9Q96QG7 549 aa13.65□□□□□ -0.22
SYNGAP1-207ENST00000628646 RRN3P2A6NIE6 340 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 DCDC2CA8MYV0 355 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 SLC16A4O15374 487 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 MAGEB2O15479 319 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 STX10O60499 249 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZSCAN20P17040 1043 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 KLRC1P26715 233 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 PSEN2P49810 448 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 CLCN3P51790 818 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 EMC2Q15006 297 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 SFR1Q86XK3 245 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 FRMD4BQ9Y2L6 1034 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 PPP2R2CQ9Y2T4 447 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 PSME4Q14997 1843 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 SYNRGQ9UMZ2 1314 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 HIP1RO75146 1068 aa13.64□□□□□ -0.23
SYNGAP1-207ENST00000628646 PPP2R5CQ13362 524 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms