RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CHMP2AO43633 222 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 STBD1O95210 358 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 TDP2O95551 362 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 EYA4O95677 639 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 DARSP14868 501 aaKnown RBP14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 CDC42EP1Q00587 391 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 TBC1D8BQ0IIM8 1120 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 XKR3Q5GH77 459 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 KRT25Q7Z3Z0 450 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 ADGRD2Q7Z7M1 963 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 UPF3BQ9BZI7 483 aaKnown RBP14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 IGFLR1Q9H665 355 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 PDRG1Q9NUG6 133 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 CD207Q9UJ71 328 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 LZTS1Q9Y250 596 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 STK36Q9NRP7 1315 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 C5orf42Q9H799 3197 aa14.04□□□□□ -0.16
SOX2-OT-247ENST00000628347 FSD2A1L4K1 749 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 FSCN2O14926 492 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 CDKL5O76039 1030 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 ZSCAN20P17040 1043 aaPredicted RBP14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 LAG3P18627 525 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 PLA2G5P39877 138 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 COASYQ13057 564 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 NONOQ15233 471 aaKnown RBP eCLIP14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 SPOUT1Q5T280 376 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 GJA10Q969M2 543 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 AIFM3Q96NN9 605 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 POP1Q99575 1024 aaKnown RBP14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 CLEC1BQ9P126 229 aa14.03□□□□□ -0.16
SOX2-OT-247ENST00000628347 PRR33A8MZF0 331 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 DCXO43602 365 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 FGF18O76093 207 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 CSPG5O95196 566 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 FGFR1P11362 822 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 IBSPP21815 317 aaPredicted RBP14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 NRIP1P48552 1158 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 NDUFV1P49821 464 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 PLCB3Q01970 1234 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 SCRN1Q12765 414 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 STK3Q13188 491 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 CLUL1Q15846 466 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 ECHDC2Q86YB7 292 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 SMRP1Q8NCR6 262 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 CDCA3Q99618 268 aaPredicted RBP14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 PHF20Q9BVI0 1012 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 TLR9Q9NR96 1032 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 HCSTQ9UBK5 93 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 DDX25Q9UHL0 483 aaKnown RBP14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 HCN4Q9Y3Q4 1203 aa14.02□□□□□ -0.17
SOX2-OT-247ENST00000628347 A0A0U1RQF3 1178 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 FAM86C2PA6NEL3 165 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 PFKFB2O60825 505 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 MAFO75444 373 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 GLP2RO95838 553 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 EOMESO95936 686 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 GCFC2P16383 781 aaKnown RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 ANAPC15P60006 121 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 PPP2R5CQ13362 524 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 DUSP6Q16828 381 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 INF2Q27J81 1249 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 MTERF2Q49AM1 385 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 PPP4R3AQ6IN85 833 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 LRRC55Q6ZSA7 311 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 ZNF598Q86UK7 904 aaKnown RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 ZNF410Q86VK4 478 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 THNSL1Q8IYQ7 743 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 NLRP7Q8WX94 980 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 RSPH1Q8WYR4 309 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 MRPS27Q92552 414 aaKnown RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 FAM20AQ96MK3 541 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 JPH2Q9BR39 696 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 TRAIPQ9BWF2 469 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 GCOM2Q9BZD3 368 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 TLE6Q9H808 572 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 KCNMB3Q9NPA1 279 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 CHST12Q9NRB3 414 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 SEPT9Q9UHD8 586 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-247ENST00000628347 SLC37A4O43826 429 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 XBP1P17861 261 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 PPM1AP35813 382 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 DNM2P50570 870 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 ERVFC1P60507 584 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 PSMC5P62195 406 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 DRP2Q13474 957 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 NEK8Q86SG6 692 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 FAM122AQ96E09 287 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 SCLT1Q96NL6 688 aa14□□□□□ -0.17
SOX2-OT-247ENST00000628347 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
SOX2-OT-247ENST00000628347 SLKQ9H2G2 1235 aaPredicted RBP14□□□□□ -0.17
SOX2-OT-247ENST00000628347 VAV3Q9UKW4 847 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms