RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TTC38Q5R3I4 469 aa24.99■■□□□ 1.59
SF1-220ENST00000626028 CMTR2Q8IYT2 770 aaKnown RBP24.99■■□□□ 1.59
SF1-220ENST00000626028 CLP1Q92989 425 aaKnown RBP24.99■■□□□ 1.59
SF1-220ENST00000626028 ADAM2Q99965 735 aa24.99■■□□□ 1.59
SF1-220ENST00000626028 GCOM2Q9BZD3 368 aaPredicted RBP24.99■■□□□ 1.59
SF1-220ENST00000626028 ELAC1Q9H777 363 aaKnown RBP24.99■■□□□ 1.59
SF1-220ENST00000626028 ANKEF1Q9NU02 776 aa24.99■■□□□ 1.59
SF1-220ENST00000626028 SUCLA2Q9P2R7 463 aaPredicted RBP24.99■■□□□ 1.59
SF1-220ENST00000626028 TMEM150BA6NC51 233 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 LPXNO60711 386 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 RB1P06400 928 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 OR52Z1P0C646 297 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 POLGP54098 1239 aaPredicted RBP24.98■■□□□ 1.59
SF1-220ENST00000626028 PLA2G4FQ68DD2 849 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 TPH2Q8IWU9 490 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 FBXO22Q8NEZ5 403 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 TCP11Q8WWU5 503 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 NLRP7Q8WX94 980 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 SCLT1Q96NL6 688 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 TMEM60Q9H2L4 133 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 TUFT1Q9NNX1 390 aa24.98■■□□□ 1.59
SF1-220ENST00000626028 C9IYK1 514 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 C5orf67F2Z3F1 127 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 LAD1O00515 517 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 ASAP2O43150 1006 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 ATP2B1P20020 1258 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 FAM189BP81408 668 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 CYP4A11Q02928 519 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 CTTNQ14247 550 aaKnown RBP24.97■■□□□ 1.59
SF1-220ENST00000626028 DSC3Q14574 896 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 EPC2Q52LR7 807 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 TMEM192Q8IY95 271 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 CHST12Q9NRB3 414 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 LRFN2Q9ULH4 789 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 PCDHB7Q9Y5E2 793 aa24.97■■□□□ 1.59
SF1-220ENST00000626028 ZSCAN20P17040 1043 aaPredicted RBP24.96■■□□□ 1.59
SF1-220ENST00000626028 MUTP22033 750 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 NPEPPSP55786 919 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 DRP2Q13474 957 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 BTG3Q14201 252 aaPredicted RBP24.96■■□□□ 1.59
SF1-220ENST00000626028 ERMNQ8TAM6 284 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 PSPC1Q8WXF1 523 aaKnown RBP24.96■■□□□ 1.59
SF1-220ENST00000626028 PPP1R16BQ96T49 567 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 C17orf80Q9BSJ5 609 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 STK24Q9Y6E0 443 aa24.96■■□□□ 1.59
SF1-220ENST00000626028 H3BNC9 293 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 RFXAPO00287 272 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 MGEA5O60502 916 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 SFPQP23246 707 aaKnown RBP eCLIP24.95■■□□□ 1.58
SF1-220ENST00000626028 GJB2P29033 226 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 ZNF174Q15697 407 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 RILPL1Q5EBL4 403 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 XKR9Q5GH70 373 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 SPRED2Q7Z698 418 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 RSPH1Q8WYR4 309 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 SH2D3AQ9BRG2 576 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 POLR3CQ9BUI4 534 aaPredicted RBP24.95■■□□□ 1.58
SF1-220ENST00000626028 PLVAPQ9BX97 442 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 TMEM161AQ9NX61 479 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 DACT1Q9NYF0 836 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 MTUS1Q9ULD2 1270 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 SMC3Q9UQE7 1217 aa24.95■■□□□ 1.58
SF1-220ENST00000626028 DGAT1O75907 488 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 BMPR1AP36894 532 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 FXR2P51116 673 aaKnown RBP eCLIP24.94■■□□□ 1.584e-18■■□□□ 13.9
SF1-220ENST00000626028 PCBP1Q15365 356 aaKnown RBP eCLIP24.94■■□□□ 1.581e-8■■■□□ 15.5
SF1-220ENST00000626028 PTPROQ16827 1216 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 RHPN2Q8IUC4 686 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 GDPD5Q8WTR4 605 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 TRAIPQ9BWF2 469 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 RAB34Q9BZG1 259 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 COL4A3BPQ9Y5P4 624 aa24.94■■□□□ 1.58
SF1-220ENST00000626028 A0A087WZ62 844 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 POTEMA6NI47 508 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 RBAK-RBAKDNI3L0D1 243 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 HOXA2O43364 376 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 LINC00271P0C7V0 271 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 RPA1P27694 616 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 POU5F1BQ06416 359 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 PDIA5Q14554 519 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 MXD4Q14582 209 aaPredicted RBP24.93■■□□□ 1.58
SF1-220ENST00000626028 EMC2Q15006 297 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 NAALADL2Q58DX5 795 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 HAUS3Q68CZ6 603 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 C4orf32Q8N8J7 132 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 ZNF579Q8NAF0 562 aaKnown RBP24.93■■□□□ 1.58
SF1-220ENST00000626028 ATXN2LQ8WWM7 1075 aaKnown RBP24.93■■□□□ 1.58
SF1-220ENST00000626028 MTRQ99707 1265 aa24.93■■□□□ 1.58
SF1-220ENST00000626028 FDXACB1Q9BRP7 624 aaPredicted RBP24.93■■□□□ 1.58
SF1-220ENST00000626028 C11orf84Q9BUA3 381 aaPredicted RBP24.93■■□□□ 1.58
SF1-220ENST00000626028 ATG2AQ2TAZ0 1938 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 H3BQV1 296 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 SPATA31C1P0DKV0 1188 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 PRPHP41219 470 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 TECP42680 631 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 TOB1P50616 345 aaPredicted RBP24.92■■□□□ 1.58
SF1-220ENST00000626028 CUL4AQ13619 759 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 SRGAP1Q7Z6B7 1085 aa24.92■■□□□ 1.58
SF1-220ENST00000626028 PRPF31Q8WWY3 499 aaKnown RBP24.92■■□□□ 1.58
SF1-220ENST00000626028 P2RX5Q93086 422 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms