RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TLL1O43897 1013 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 MED24O75448 989 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 STAG3L1P0CL83 205 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 DARSP14868 501 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 CD52P31358 61 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 TXLNAP40222 546 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 UBA7P41226 1012 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 NFX1Q12986 1120 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 SRGAP1Q7Z6B7 1085 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 RHPN2Q8IUC4 686 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 CALML4Q96GE6 196 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 LRCH3Q96II8 777 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 RAD9AQ99638 391 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 OSMRQ99650 979 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 TIPINQ9BVW5 301 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 PBX4Q9BYU1 374 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 ADAMTS10Q9H324 1103 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 ERVK-5Q9HDB9 667 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 DACT1Q9NYF0 836 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 KCNG1Q9UIX4 513 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 LAMA3Q16787 3333 aa15.58■□□□□ 0.08
SNRPA1-216ENST00000626000 COL4A6Q14031 1691 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 DENND3A2RUS2 1198 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 TMEM150BA6NC51 233 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 ZSCAN22P10073 491 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 ZSCAN20P17040 1043 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 PHKA2P46019 1235 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 NCBP1Q09161 790 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 PPP2R5AQ15172 486 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 HYIQ5T013 277 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 MYOCDQ8IZQ8 938 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 PIGOQ8TEQ8 1089 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 TOP1MTQ969P6 601 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 AGO3Q9H9G7 860 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 CHST12Q9NRB3 414 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 DDX19AQ9NUU7 478 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 KCND2Q9NZV8 630 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 ST3GAL5Q9UNP4 418 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 KIAA1024Q9UPX6 916 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 ATP6V1DQ9Y5K8 247 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 PHLPP2Q6ZVD8 1323 aa15.57■□□□□ 0.08
SNRPA1-216ENST00000626000 EYA4O95677 639 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 SKIP12755 728 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 PADI6Q6TGC4 694 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 SLC24A5Q71RS6 500 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 NPAS4Q8IUM7 802 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 DEFB123Q8N688 67 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 RASSF8Q8NHQ8 419 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 PRPF31Q8WWY3 499 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 KIFAP3Q92845 792 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 NLRP4Q96MN2 994 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 SAMD11Q96NU1 681 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 NFKBIZQ9BYH8 718 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 CFAP45Q9UL16 551 aa15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 NOC2LQ9Y3T9 749 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-216ENST00000626000 MYH15Q9Y2K3 1946 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 ENPP3O14638 875 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 HOXA2O43364 376 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 YEATS4O95619 227 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 F13A1P00488 732 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 CYP11B2P19099 503 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 DEFB103AP81534 67 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 PPP2R2DQ66LE6 453 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 CABP7Q86V35 215 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 FAM228AQ86W67 206 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 TMEM40Q8WWA1 233 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 YME1L1Q96TA2 773 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 SH2D3AQ9BRG2 576 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 C2orf40Q9H1Z8 148 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 BHMT2Q9H2M3 363 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 ZNF576Q9H609 170 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 ELAC1Q9H777 363 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 C17orf75Q9HAS0 396 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 RGS18Q9NS28 235 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 LRFN2Q9ULH4 789 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 RWDD3Q9Y3V2 267 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 SRPRBQ9Y5M8 271 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 TTC3P53804 2025 aa15.55■□□□□ 0.08
SNRPA1-216ENST00000626000 A0A087WZ62 844 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 USO1O60763 962 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 ERLIN2O94905 339 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 SCP2P22307 547 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 ARL2P36404 184 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 SARSP49591 514 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 RAB27AP51159 221 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 HTRA4P83105 476 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 DRP2Q13474 957 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 SLC39A14Q15043 492 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 STK38Q15208 465 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 PTPAQ15257 358 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 IL17AQ16552 155 aa15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 KRI1Q8N9T8 703 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-216ENST00000626000 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms