RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SPOCK3Q9BQ16 436 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 MXRA8Q9BRK3 442 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 NIFKQ9BYG3 293 aaKnown RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 ANO3Q9BYT9 981 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 SLKQ9H2G2 1235 aaPredicted RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 TUT1Q9H6E5 874 aaKnown RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 NCOA5Q9HCD5 579 aaKnown RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 JADE2Q9NQC1 790 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 HDAC6Q9UBN7 1215 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 GTF2IRD1Q9UHL9 959 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 TCEAL9Q9UHQ7 104 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 UBIAD1Q9Y5Z9 338 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 NID2Q14112 1375 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 UMODL1Q5DID0 1318 aa7.27□□□□□ -1.24
TCF4-249ENST00000625716 ESYT2A0FGR8 921 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 KRBA1A5PL33 1030 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 HAS3O00219 553 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 DEXIO95424 95 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 PARNO95453 639 aaKnown RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 PROCP04070 461 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 SMIM10L2AP0DMW4 78 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 SMIM10L2BP0DMW5 78 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 BMP4P12644 408 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 HOXD8P13378 290 aaPredicted RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 SELPP16109 830 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 XBP1P17861 261 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 ITGB5P18084 799 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 COL8A1P27658 744 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 SOX11P35716 441 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 TCF7P36402 384 aaPredicted RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 NLRP5P59047 1200 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 PTK7Q13308 1070 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 CEP55Q53EZ4 464 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 FAM109BQ6ICB4 259 aaPredicted RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 C16orf59Q7L2K0 433 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 OTOP2Q7RTS6 562 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 AFAP1L1Q8TED9 768 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 SEPT1Q8WYJ6 367 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 HERVK_113Q902F9 699 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 GLG1Q92896 1179 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 ATP6V0A1Q93050 837 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 C16orf70Q9BSU1 422 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 ZMYND12Q9H0C1 365 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 WNT8AQ9H1J5 351 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 AZI2Q9H6S1 392 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 BCAS3Q9H6U6 928 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 JPH1Q9HDC5 661 aaPredicted RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 SH3GLB2Q9NR46 395 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 KCNH7Q9NS40 1196 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 TMEM260Q9NX78 707 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 SLC9A2Q9UBY0 812 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 MSRAQ9UJ68 235 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 GDF2Q9UK05 429 aaPredicted RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 PCDHGC4Q9Y5F7 938 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 SLC4A7Q9Y6M7 1214 aa7.27□□□□□ -1.25
TCF4-249ENST00000625716 BAZ2BQ9UIF8 2168 aaKnown RBP7.27□□□□□ -1.25
TCF4-249ENST00000625716 CEP290O15078 2479 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 A0A1W2PNR3 127 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 A6NJY4 79 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 ATP9AO75110 1047 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 IQCF3P0C7M6 154 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 KCNA2P16389 499 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 SREBF1P36956 1147 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 THPOP40225 353 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 NEK4P51957 841 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 ARHGAP4P98171 946 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 TNP2Q05952 138 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 RAB30Q15771 203 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 NTRK3Q16288 839 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 PKN1Q16512 942 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 Q7L0L9 218 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 LRRC8DQ7L1W4 858 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 NIPA1Q7RTP0 329 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 NLRP8Q86W28 1048 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 PLA2G4DQ86XP0 818 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 WASF1Q92558 559 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 FAM161BQ96MY7 647 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 C22orf23Q9BZE7 217 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 RNPEPQ9H4A4 650 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 SMARCAD1Q9H4L7 1026 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 ERAP1Q9NZ08 941 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 VPS54Q9P1Q0 977 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 LTBP2Q14767 1821 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 NFASCO94856 1347 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 NRCAMQ92823 1304 aa7.26□□□□□ -1.25
TCF4-249ENST00000625716 KIAA1217Q5T5P2 1943 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 RSPH10B2B2RC85 870 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 DDX39AO00148 427 aaKnown RBP7.25□□□□□ -1.25
TCF4-249ENST00000625716 MEIS1O00470 390 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 BACH1O14867 736 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 PFKFB2O60825 505 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 CYP3A4P08684 503 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 RSPH10BP0C881 870 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 ARP10275 920 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 CKBP12277 381 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 MARK3P27448 753 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 KCNJ6P48051 423 aa7.25□□□□□ -1.25
TCF4-249ENST00000625716 ZNF200P98182 395 aaPredicted RBP7.25□□□□□ -1.25
TCF4-249ENST00000625716 SETQ01105 290 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms