RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 GSTA5Q7RTV2 222 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 CYP2W1Q8TAV3 490 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 GMLQ99445 158 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 HIPK3Q9H422 1215 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 TUFT1Q9NNX1 390 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PCDHB12Q9Y5F1 795 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 A0A0G2JLL6 359 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 ESYT2A0FGR8 921 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 POLR2BP30876 1174 aaKnown RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 MORC3Q14149 939 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PCNX4Q63HM2 1172 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PRRT2Q7Z6L0 340 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 RYBPQ8N488 228 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 MKL1Q969V6 931 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PRMT7Q9NVM4 692 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 TBKBP1A7MCY6 615 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 ABCB4P21439 1286 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PRPHP41219 470 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PSMC6P62333 389 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 GLRA4Q5JXX5 417 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 NFRKBQ6P4R8 1299 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 SAMD3Q8N6K7 520 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PHF20Q9BVI0 1012 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 FAM217BQ9NTX9 383 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 RBAKQ9NYW8 714 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 HOXA2O43364 376 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 THAP12O43422 761 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 NPTXRO95502 500 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 AMHP03971 560 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 ACOT2P49753 483 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 SLC26A2P50443 739 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 PDE6CP51160 858 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 ORC2Q13416 577 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 CUL4AQ13619 759 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 ZNF699Q32M78 642 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 LMBRD2Q68DH5 695 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 TEX2Q8IWB9 1127 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 SENP7Q9BQF6 1050 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 PDGFCQ9NRA1 345 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 BTBD7Q9P203 1132 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 GOLGA8SH3BPF8 625 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 SLC10A3P09131 477 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 XPAP23025 273 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 NMT1P30419 496 aaKnown RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 MDM2Q00987 491 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 GABPAQ06546 454 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 RESTQ13127 1097 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 RAD54LQ92698 747 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 TARS2Q9BW92 718 aaKnown RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 MIS12Q9H081 205 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 RIPK3Q9Y572 518 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 URI1O94763 535 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 SREBF1P36956 1147 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 ITGA7Q13683 1181 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 LMBR1Q8WVP7 490 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
HDAC9-229ENST00000622668 PHRF1Q9P1Y6 1649 aaKnown RBP9.86□□□□□ -0.83
HDAC9-229ENST00000622668 A0A087WZ62 844 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 A0A1W2PQ27 194 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 A0A1W2PQ64 194 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 A0A1W2PQD8 194 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 KCNJ18B7U540 433 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 KCNJ12Q14500 433 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 ATF7IP2Q5U623 682 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 PRPF31Q8WWY3 499 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 P2RX5Q93086 422 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 LENG1Q96BZ8 264 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 PAWRQ96IZ0 340 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 FDXACB1Q9BRP7 624 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 KIAA1586Q9HCI6 787 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 CYP26B1Q9NR63 512 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 SLC12A6Q9UHW9 1150 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 SLC4A7Q9Y6M7 1214 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 RPTORQ8N122 1335 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 A8MXQ7 604 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 LGALS2P05162 132 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 RPLP2P05387 115 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 ASGR1P07306 291 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 SKIP12755 728 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 UBA1P22314 1058 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 GCLMP48507 274 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 MFAP3P55082 362 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 POLR2FP61218 127 aaKnown RBP9.85□□□□□ -0.83
HDAC9-229ENST00000622668 REPS2Q8NFH8 660 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 ATP8B4Q8TF62 1192 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 ZNF560Q96MR9 790 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 RCOR1Q9UKL0 485 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 SNX9Q9Y5X1 595 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 MROH7Q68CQ1 1323 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 SEPT4O43236 478 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 URODP06132 367 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 CCL5P13501 91 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 CNGA4Q8IV77 575 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 KIFC3Q9BVG8 833 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 CCDC113Q9H0I3 377 aa9.85□□□□□ -0.83
HDAC9-229ENST00000622668 RANBP17Q9H2T7 1088 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms