RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 SIP14410 1827 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 MYADML2A6NDP7 307 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 H3BRB1 525 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 PPP1R37O75864 691 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 MYL3P08590 195 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 RARBP10826 455 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 ZNF18P17022 549 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 HOXD13P35453 343 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 PEX3P56589 373 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 GJA9P57773 515 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 RTP1P59025 263 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 BEX3Q00994 111 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 LRRC63Q05C16 580 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 DMP1Q13316 513 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 ALCAMQ13740 583 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 FSCN1Q16658 493 aaKnown RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 TPD52L1Q16890 204 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 ZNF484Q5JVG2 852 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 FOXR2Q6PJQ5 311 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 SARM1Q6SZW1 724 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 STXBP4Q6ZWJ1 553 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 ZNF720Q7Z2F6 126 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 TMEM143Q96AN5 459 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 TSG101Q99816 390 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 KCTD10Q9H3F6 313 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 TUT1Q9H6E5 874 aaKnown RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 C17orf75Q9HAS0 396 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 SAMSN1Q9NSI8 373 aaKnown RBP11.76□□□□□ -0.53
CPNE3-212ENST00000621783 WBP1LQ9NX94 342 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 TRIM17Q9Y577 477 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 FRMPD3Q5JV73 1810 aa11.76□□□□□ -0.53
CPNE3-212ENST00000621783 IGKV6-21A0A0C4DH24 114 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 GAS2O43903 313 aaKnown RBP11.75□□□□□ -0.53
CPNE3-212ENST00000621783 C22orf31O95567 290 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 INHAP05111 366 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 C6orf222P0C671 652 aaPredicted RBP11.75□□□□□ -0.53
CPNE3-212ENST00000621783 ATP1A3P13637 1013 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 INSRRP14616 1297 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 ARL2P36404 184 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 NPTX2P47972 431 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 IGBP1P78318 339 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 NKX3-2P78367 333 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 DRP2Q13474 957 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
CPNE3-212ENST00000621783 ZC2HC1CQ53FD0 456 aaPredicted RBP11.75□□□□□ -0.53
CPNE3-212ENST00000621783 HSP90AA4PQ58FG1 418 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 CDKAL1Q5VV42 579 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
CPNE3-212ENST00000621783 KAT2BQ92831 832 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 KIFC3Q9BVG8 833 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 ST6GALNAC4Q9H4F1 302 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 PTCH2Q9Y6C5 1203 aa11.75□□□□□ -0.53
CPNE3-212ENST00000621783 CCDC169A6NNP5 214 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 HAS3O00219 553 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 SLC16A4O15374 487 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 ADAMTS4O75173 837 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 ADCY5O95622 1261 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 PGK1P00558 417 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 GLRA2P23416 452 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 PSEN2P49810 448 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 PURAQ00577 322 aaKnown RBP11.74□□□□□ -0.53
CPNE3-212ENST00000621783 KCNA1Q09470 495 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 MFSD10Q14728 455 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 GRIK4Q16099 956 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 KIAA0753Q2KHM9 967 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 KSR1Q8IVT5 923 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 EXOC8Q8IYI6 725 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 LRRC71Q8N4P6 559 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 CSGALNACT2Q8N6G5 542 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 SLC17A8Q8NDX2 589 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
CPNE3-212ENST00000621783 TCP11Q8WWU5 503 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 HVCN1Q96D96 273 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 IFT74Q96LB3 600 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 JPH2Q9BR39 696 aaPredicted RBP11.74□□□□□ -0.53
CPNE3-212ENST00000621783 KATNAL1Q9BW62 490 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 SPC25Q9HBM1 224 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 XPNPEP3Q9NQH7 507 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 KMT5AQ9NQR1 393 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 TYW1Q9NV66 732 aaKnown RBP11.74□□□□□ -0.53
CPNE3-212ENST00000621783 DDX20Q9UHI6 824 aaKnown RBP11.74□□□□□ -0.53
CPNE3-212ENST00000621783 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 ADGRA3Q8IWK6 1321 aa11.74□□□□□ -0.53
CPNE3-212ENST00000621783 KPNA6O60684 536 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms