RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PAN2Q504Q3 1202 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 CMTR2Q8IYT2 770 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 DYDC2Q96IM9 177 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 C8orf76Q96K31 380 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 SH2B1Q9NRF2 756 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 C1orf112Q9NSG2 853 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 LRFN2Q9ULH4 789 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 PCDHB7Q9Y5E2 793 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 FNDC1Q4ZHG4 1894 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 KIAA1671Q9BY89 1806 aa20.13■□□□□ 0.81
SCAMP4-213ENST00000621748 NCOR1O75376 2440 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 MUC3AQ02505 3323 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 CSDE1O75534 798 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 RB1P06400 928 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 DARSP14868 501 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 FGFR4P22455 802 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 FAM189BP81408 668 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 NLRP7Q8WX94 980 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 LXNQ9BS40 222 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 CYP26B1Q9NR63 512 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 PCDHA12Q9UN75 941 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 COG5Q9UP83 839 aa20.12■□□□□ 0.81
SCAMP4-213ENST00000621748 ZBTB39O15060 712 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 NEMFO60524 1076 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 DKC1O60832 514 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 CYP4A11Q02928 519 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 CTTNQ14247 550 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 PTPROQ16827 1216 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 FAM102BQ5T8I3 360 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 C4orf19Q8IY42 314 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 HLA-CQ95604 372 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 SCLT1Q96NL6 688 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 MTMR9Q96QG7 549 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 TTC12Q9H892 705 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 SUCLA2Q9P2R7 463 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 RWDD3Q9Y3V2 267 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 ATG2AQ2TAZ0 1938 aa20.11■□□□□ 0.81
SCAMP4-213ENST00000621748 A0A087WZ62 844 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 GRM6O15303 877 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 SLITRK3O94933 977 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 BMP1P13497 986 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 ATP2B1P20020 1258 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 TXKP42681 527 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 DNM2P50570 870 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 KCNQ1P51787 676 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 HMGN5P82970 282 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 RHPN2Q8IUC4 686 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 KSR1Q8IVT5 923 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 FBXO18Q8NFZ0 1043 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 CEP170P1Q96L14 293 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 EIF2AK1Q9BQI3 630 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 FDXACB1Q9BRP7 624 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 C11orf84Q9BUA3 381 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 TMEM60Q9H2L4 133 aa20.1■□□□□ 0.81
SCAMP4-213ENST00000621748 FGFR1P11362 822 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 YWHABP31946 246 aaKnown RBP20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 MCM2P49736 904 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 CDC42EP1Q00587 391 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 TPH2Q8IWU9 490 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 HSD17B14Q9BPX1 270 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 PLVAPQ9BX97 442 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 GCOM2Q9BZD3 368 aaPredicted RBP20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 DHX33Q9H6R0 707 aaKnown RBP20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 ZSWIM4Q9H7M6 989 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 TMEM161AQ9NX61 479 aa20.09■□□□□ 0.81
SCAMP4-213ENST00000621748 TBKBP1A7MCY6 615 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 ZSCAN20P17040 1043 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 MCM7P33993 719 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 AAK1Q2M2I8 961 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 FAM184AQ8NB25 1140 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 ADAMTS19Q8TE59 1207 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 SLC7A3Q8WY07 619 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 JPH2Q9BR39 696 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 FOXP1Q9H334 677 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 ELAC1Q9H777 363 aaKnown RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 ATP6V0A4Q9HBG4 840 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 ALG13Q9NP73 1137 aaKnown RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 PLAGL2Q9UPG8 496 aa20.08■□□□□ 0.81
SCAMP4-213ENST00000621748 ARID2Q68CP9 1835 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 POLGP54098 1239 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 CAMK1Q14012 370 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 TIGD5Q53EQ6 642 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 XKR9Q5GH70 373 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 TCEAL5Q5H9L2 206 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 OTUD6AQ7L8S5 288 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 ZNF410Q86VK4 478 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 P2RX5Q93086 422 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 TMEM143Q96AN5 459 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 UBE2ZQ9H832 354 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 RNF19AQ9NV58 838 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 HCSTQ9UBK5 93 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 PPME1Q9Y570 386 aa20.07■□□□□ 0.8
SCAMP4-213ENST00000621748 ITGB1P05556 798 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 DNAJB1P25685 340 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 RFC5P40937 340 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms