RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 STX17P56962 302 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 ZNF200P98182 395 aaPredicted RBP23.82■■□□□ 1.4
SGMS1-210ENST00000619438 PDIA5Q14554 519 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 FILIP1LQ4L180 1135 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 C9orf50Q5SZB4 431 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 ADSSL1Q8N142 457 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 SCLYQ96I15 445 aa23.82■■□□□ 1.4
SGMS1-210ENST00000619438 NAP1L4Q99733 375 aaKnown RBP23.82■■□□□ 1.4
SGMS1-210ENST00000619438 ACRP10323 421 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 PLCG1P19174 1290 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 MARK3P27448 753 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 HSP90AA4PQ58FG1 418 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 POTEDQ86YR6 584 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 TMEM139Q8IV31 216 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 RPUSD2Q8IZ73 545 aaKnown RBP23.81■■□□□ 1.4
SGMS1-210ENST00000619438 ATP6V0A1Q93050 837 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 PPP1R13BQ96KQ4 1090 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 C7orf25Q9BPX7 421 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 SETD4Q9NVD3 440 aa23.81■■□□□ 1.4
SGMS1-210ENST00000619438 ARHGAP6O43182 974 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 CTIFO43310 598 aaKnown RBP23.8■■□□□ 1.4
SGMS1-210ENST00000619438 STX10O60499 249 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 GCFC2P16383 781 aaKnown RBP23.8■■□□□ 1.4
SGMS1-210ENST00000619438 CALCRLQ16602 461 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 TC2NQ8N9U0 490 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 NELFBQ8WX92 580 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 LRCH3Q96II8 777 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 MMTAG2Q9BU76 263 aaKnown RBP23.8■■□□□ 1.4
SGMS1-210ENST00000619438 WNT8AQ9H1J5 351 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 ITIH6Q6UXX5 1313 aa23.8■■□□□ 1.4
SGMS1-210ENST00000619438 PITPNM1O00562 1244 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 BACH1O14867 736 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 PPP1R2P41236 205 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 PRCPP42785 496 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 STAT5BP51692 787 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 AMPD3Q01432 767 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 PTK7Q13308 1070 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 CAGE1Q8TC20 777 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 LRRC15Q8TF66 581 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 RNPC3Q96LT9 517 aaKnown RBP23.79■■□□□ 1.4
SGMS1-210ENST00000619438 RAB34Q9BZG1 259 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 IL23AQ9NPF7 189 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 DHX15O43143 795 aaKnown RBP23.79■■□□□ 1.4
SGMS1-210ENST00000619438 TECP42680 631 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 TMEM266Q2M3C6 531 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 LRIT3Q3SXY7 679 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 KMT5BQ4FZB7 885 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 COBLL1Q53SF7 1204 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 CCDC47Q96A33 483 aaKnown RBP23.79■■□□□ 1.4
SGMS1-210ENST00000619438 CALML4Q96GE6 196 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.79■■□□□ 1.43e-7■□□□□ 10.7
SGMS1-210ENST00000619438 TRMT1Q9NXH9 659 aaKnown RBP23.79■■□□□ 1.4
SGMS1-210ENST00000619438 STK17AQ9UEE5 414 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 SAMM50Q9Y512 469 aa23.79■■□□□ 1.4
SGMS1-210ENST00000619438 TDP2O95551 362 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 IQCF3P0C7M6 154 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 STIM1Q13586 685 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 HIC1Q14526 733 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 MIS18BP1Q6P0N0 1132 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 ZNF365Q70YC5 407 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 DEFB128Q7Z7B8 93 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 LENG9Q96B70 501 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 PANX2Q96RD6 677 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 TRIM9Q9C026 710 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 NRCAMQ92823 1304 aa23.78■■□□□ 1.4
SGMS1-210ENST00000619438 CYP3A7-CYP3A51PA0A087WV96 503 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 MSH4O15457 936 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 TREHO43280 583 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 LGR5O75473 907 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 ATG7O95352 703 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 CCNE2O96020 404 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 FGBP02675 491 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 CYP3A7P24462 503 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 KRT76Q01546 638 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 SYCP1Q15431 976 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 Q4G0T1 1027 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 FAM160B1Q5W0V3 765 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 PSRC1Q6PGN9 363 aaPredicted RBP23.77■■□□□ 1.4
SGMS1-210ENST00000619438 C16orf59Q7L2K0 433 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 ANKRD20A12PQ8NF67 263 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 AFAP1L1Q8TED9 768 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 DDX25Q9UHL0 483 aaKnown RBP23.77■■□□□ 1.4
SGMS1-210ENST00000619438 GDAQ9Y2T3 454 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 EMSYQ7Z589 1322 aa23.77■■□□□ 1.4
SGMS1-210ENST00000619438 SLC37A4O43826 429 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 GAS7O60861 476 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 PPFIA1Q13136 1202 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 TMEM240Q5SV17 173 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 ZNF746Q6NUN9 644 aaPredicted RBP23.76■■□□□ 1.39
SGMS1-210ENST00000619438 SWSAP1Q6NVH7 229 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 ABHD15Q6UXT9 468 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 PLPPR4Q7Z2D5 763 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 MTERF4Q7Z6M4 381 aaKnown RBP23.76■■□□□ 1.39
SGMS1-210ENST00000619438 DHTKD1Q96HY7 919 aaPredicted RBP23.76■■□□□ 1.39
SGMS1-210ENST00000619438 MAP7D2Q96T17 732 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 PCYT2Q99447 389 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 BAG1Q99933 345 aaPredicted RBP23.76■■□□□ 1.39
SGMS1-210ENST00000619438 LRWD1Q9UFC0 647 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 TRPC6Q9Y210 931 aa23.76■■□□□ 1.39
SGMS1-210ENST00000619438 TEX33O43247 280 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms