RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 EVCP57679 992 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 ACTR2P61160 394 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 FUT2Q10981 343 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 MTMR3Q13615 1198 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 DNTTIP2Q5QJE6 756 aaKnown RBP9.68□□□□□ -0.86
GPC6-202ENST00000617456 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
GPC6-202ENST00000617456 NIPA1Q7RTP0 329 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 NME8Q8N427 588 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 TMEM105Q8N8V8 129 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
GPC6-202ENST00000617456 TMEM40Q8WWA1 233 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
GPC6-202ENST00000617456 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
GPC6-202ENST00000617456 SDF4Q9BRK5 362 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 CWH43Q9H720 699 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 ATP6V0A4Q9HBG4 840 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 C1orf112Q9NSG2 853 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 BARHL2Q9NY43 387 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
GPC6-202ENST00000617456 PCDHA6Q9UN73 950 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 ST3GAL5Q9UNP4 418 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 NR2E1Q9Y466 385 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 PCDHA8Q9Y5H6 950 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 GVINP1Q7Z2Y8 2422 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 LOXHD1Q8IVV2 1947 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 NID2Q14112 1375 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 NFASCO94856 1347 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 KDM3AQ9Y4C1 1321 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 ESYT2A0FGR8 921 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 PRR23AA6NEV1 266 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 C9IYK1 514 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 DDX39AO00148 427 aaKnown RBP9.67□□□□□ -0.86
GPC6-202ENST00000617456 BACH1O14867 736 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 BRD1O95696 1058 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 WEE2P0C1S8 567 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 ARP10275 920 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 RXRAP19793 462 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 PBX3P40426 434 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 FOXK2Q01167 660 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 RTN1Q16799 776 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 KIZQ2M2Z5 673 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 TMEM184AQ6ZMB5 413 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 SLC24A5Q71RS6 500 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 PLPPR4Q7Z2D5 763 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 TMC7Q7Z402 723 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 FRMD5Q7Z6J6 570 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 RAB11FIP4Q86YS3 637 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 OTUD6BQ8N6M0 293 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 CYP2W1Q8TAV3 490 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 TSPYL1Q9H0U9 437 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 MFSD1Q9H3U5 465 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 RGS18Q9NS28 235 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 KCNH7Q9NS40 1196 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 SORCS3Q9UPU3 1222 aa9.67□□□□□ -0.86
GPC6-202ENST00000617456 EP300Q09472 2414 aaPredicted RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 FNDC1Q4ZHG4 1894 aaPredicted RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 CNTNAP5Q8WYK1 1306 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 PROB1E7EW31 1015 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 GPR182O15218 404 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 ASGR2P07307 311 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 HOXB8P17481 243 aaPredicted RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 CLK2P49760 499 aaKnown RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 NUBP1P53384 320 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 KRT17Q04695 432 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 KCNC3Q14003 757 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 CEP55Q53EZ4 464 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 ODR4Q5SWX8 454 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 LRRC55Q6ZSA7 311 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 TRMT1LQ7Z2T5 733 aaKnown RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 HEATR3Q7Z4Q2 680 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 UBALD2Q8IYN6 164 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 KIAA0319LQ8IZA0 1049 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 RNF169Q8NCN4 708 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 FLCNQ8NFG4 579 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 CASP10Q92851 521 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 PGBD1Q96JS3 809 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 ZNF558Q96NG5 402 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 OSMRQ99650 979 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 MXRA8Q9BRK3 442 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 POMKQ9H5K3 350 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 NGRNQ9NPE2 291 aaKnown RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 LZTS1Q9Y250 596 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
GPC6-202ENST00000617456 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
GPC6-202ENST00000617456 KLF18A0A0U1RQI7 1052 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 VGLL3A8MV65 326 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 MEIS1O00470 390 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 PRPF3O43395 683 aaKnown RBP9.65□□□□□ -0.86
GPC6-202ENST00000617456 HBP1O60381 514 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 ATG7O95352 703 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 VTNP04004 478 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 CYP3A4P08684 503 aa9.65□□□□□ -0.86
GPC6-202ENST00000617456 GNA11P29992 359 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms