RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 KLRC1P26715 233 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 ARL2P36404 184 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 ADAM17P78536 824 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 POU5F1BQ06416 359 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 TYRO3Q06418 890 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 MAPK7Q13164 816 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 DMP1Q13316 513 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-217ENST00000616545 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 FAM102BQ5T8I3 360 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 TAF2Q6P1X5 1199 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 MTHFD1LQ6UB35 978 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 NME8Q8N427 588 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 MYCT1Q8N699 235 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 PSPC1Q8WXF1 523 aaKnown RBP12.89□□□□□ -0.35
TARDBP-217ENST00000616545 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 ST6GALNAC4Q9H4F1 302 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 GTF2IRD1Q9UHL9 959 aa12.89□□□□□ -0.35
TARDBP-217ENST00000616545 UBE4BO95155 1302 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
TARDBP-217ENST00000616545 CASP1P29466 404 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 NAMPTP43490 491 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 GJA8P48165 433 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 TFDP1Q14186 410 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 FAM178BQ8IXR5 827 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 DAW1Q8N136 415 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 U2AF1L4Q8WU68 220 aaKnown RBP12.88□□□□□ -0.35
TARDBP-217ENST00000616545 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 HVCN1Q96D96 273 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-217ENST00000616545 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-217ENST00000616545 ZHX3Q9H4I2 956 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 SCN10AQ9Y5Y9 1956 aa12.88□□□□□ -0.35
TARDBP-217ENST00000616545 NPHP3-ACAD11A0A0J9YXS1 232 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 ZNF720Q7Z2F6 126 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 DHTKD1Q96HY7 919 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 BPIFA3Q9BQP9 254 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 NFKBIZQ9BYH8 718 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 C2orf40Q9H1Z8 148 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 TSPY26PQ9H489 355 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 MRPL44Q9H9J2 332 aaKnown RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 STARD7Q9NQZ5 370 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 SETD4Q9NVD3 440 aa12.87□□□□□ -0.35
TARDBP-217ENST00000616545 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-217ENST00000616545 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 A0A1W2PQ45 241 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-217ENST00000616545 A0A1W2PQY0 241 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 BIN1O00499 593 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 PSMA7O14818 248 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 CAND2O75155 1236 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 EFNA5P52803 228 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 PEX3P56589 373 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 SNRPFP62306 86 aaKnown RBP12.86□□□□□ -0.35
TARDBP-217ENST00000616545 IGBP1P78318 339 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-217ENST00000616545 STK4Q13043 487 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 PCBP1Q15365 356 aaKnown RBP eCLIP12.86□□□□□ -0.35
TARDBP-217ENST00000616545 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-217ENST00000616545 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 ZNF410Q86VK4 478 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 METTL13Q8N6R0 699 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 MCOLN1Q9GZU1 580 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 MROH7Q68CQ1 1323 aa12.86□□□□□ -0.35
TARDBP-217ENST00000616545 BICDL2A1A5D9 508 aa12.85□□□□□ -0.35
TARDBP-217ENST00000616545 ARVCFO00192 962 aa12.85□□□□□ -0.35
TARDBP-217ENST00000616545 CYP2C9P11712 490 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms