RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 ZSWIM4Q9H7M6 989 aa14.17□□□□□ -0.14
CSTF1-208ENST00000613138 POLD4Q9HCU8 107 aa14.17□□□□□ -0.14
CSTF1-208ENST00000613138 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.17□□□□□ -0.14
CSTF1-208ENST00000613138 SUCLA2Q9P2R7 463 aaPredicted RBP14.17□□□□□ -0.14
CSTF1-208ENST00000613138 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
CSTF1-208ENST00000613138 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
CSTF1-208ENST00000613138 MYH15Q9Y2K3 1946 aa14.17□□□□□ -0.14
CSTF1-208ENST00000613138 BRWD1Q9NSI6 2320 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 VPS37CA5D8V6 355 aaPredicted RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 EFCAB14O75071 495 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 RPLP2P05387 115 aaKnown RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 IGFBP4P22692 258 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 EMC2Q15006 297 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 CCDC85BQ15834 202 aaPredicted RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 FAM173BQ6P4H8 233 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 MAEAQ7L5Y9 396 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 CRIPAKQ8N1N5 446 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 MAFAQ8NHW3 353 aaPredicted RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 NLRP4Q96MN2 994 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 SCLT1Q96NL6 688 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 YME1L1Q96TA2 773 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 ADAM2Q99965 735 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 DHX33Q9H6R0 707 aaKnown RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.16□□□□□ -0.14
CSTF1-208ENST00000613138 RALGAPA2Q2PPJ7 1873 aa14.16□□□□□ -0.14
CSTF1-208ENST00000613138 K7ELQ4 463 aaPredicted RBP14.15□□□□□ -0.14
CSTF1-208ENST00000613138 LPXNO60711 386 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.14
CSTF1-208ENST00000613138 TMOD1P28289 359 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 TRAPPC10P48553 1259 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
CSTF1-208ENST00000613138 DSC3Q14574 896 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 PAN2Q504Q3 1202 aaKnown RBP14.15□□□□□ -0.14
CSTF1-208ENST00000613138 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 IL27Q8NEV9 243 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
CSTF1-208ENST00000613138 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 MINDY3Q9H8M7 445 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 RC3H2Q9HBD1 1191 aaKnown RBP14.15□□□□□ -0.14
CSTF1-208ENST00000613138 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
CSTF1-208ENST00000613138 PLXNA4Q9HCM2 1894 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 USO1O60763 962 aaKnown RBP14.14□□□□□ -0.15
CSTF1-208ENST00000613138 CSPG5O95196 566 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 SRGAP2CP0DJJ0 459 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 RARRES1P49788 294 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 GRIN1Q05586 938 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 GRB10Q13322 594 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 LONRF3Q496Y0 759 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 FAM102BQ5T8I3 360 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 PRPF31Q8WWY3 499 aaKnown RBP14.14□□□□□ -0.15
CSTF1-208ENST00000613138 KIF3AQ9Y496 699 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 INSL6Q9Y581 213 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 MYH11P35749 1972 aa14.14□□□□□ -0.15
CSTF1-208ENST00000613138 A0A0C4DFX4 3053 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 DENND3A2RUS2 1198 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 C9IYK1 514 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 LYPLA2O95372 231 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 FGFR1P11362 822 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 SYT1P21579 422 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 EIF4BP23588 611 aaKnown RBP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 CCT6AP40227 531 aaKnown RBP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 ERVK-21P61565 698 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 LAMTOR4Q0VGL1 99 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 FAM43BQ6ZT52 329 aaPredicted RBP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 KCNK18Q7Z418 384 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 ZNF689Q96CS4 500 aaPredicted RBP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 GAS2L1Q99501 681 aaPredicted RBP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 PLIN2Q99541 437 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 MMTAG2Q9BU76 263 aaKnown RBP14.13□□□□□ -0.15
CSTF1-208ENST00000613138 IFT122Q9HBG6 1241 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 RNF19AQ9NV58 838 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 COL4A3BPQ9Y5P4 624 aa14.13□□□□□ -0.15
CSTF1-208ENST00000613138 GPR182O15218 404 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 DKC1O60832 514 aaKnown RBP eCLIP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 DGKIO75912 1065 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 SARSP49591 514 aaKnown RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 ATP2C1P98194 919 aaPredicted RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 RESTQ13127 1097 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 ORC2Q13416 577 aaPredicted RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 FOXD4L5Q5VV16 416 aaPredicted RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 OTUD6AQ7L8S5 288 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 IGSF22Q8N9C0 903 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 FOXD4L4Q8WXT5 416 aaPredicted RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 SLC7A3Q8WY07 619 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 MTRQ99707 1265 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 POLR3CQ9BUI4 534 aaPredicted RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 FTHL17Q9BXU8 183 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 TUFT1Q9NNX1 390 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 RGS18Q9NS28 235 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 ANKEF1Q9NU02 776 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 LRWD1Q9UFC0 647 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 MTCH2Q9Y6C9 303 aa14.12□□□□□ -0.15
CSTF1-208ENST00000613138 MRPL42Q9Y6G3 142 aaKnown RBP14.12□□□□□ -0.15
CSTF1-208ENST00000613138 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms