RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 ADGRG1Q9Y653 693 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 SLC26A4O43511 780 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 ARMC3Q5W041 872 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 ZFP1Q6P2D0 407 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 TUBA3EQ6PEY2 450 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 CDC42BPBQ9Y5S2 1711 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 WASLO00401 505 aaPredicted RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 CCDC153Q494R4 210 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 TOM1L2Q6ZVM7 507 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 SYMPKQ92797 1274 aaKnown RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 OTUB1Q96FW1 271 aaPredicted RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 TRIM45Q9H8W5 580 aaPredicted RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 LZTS1Q9Y250 596 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 AP3B1O00203 1094 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 ZPR1O75312 459 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 C14orf93Q9H972 538 aaKnown RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 FAM83GA6ND36 823 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 PUM3Q15397 648 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 MRPL1Q9BYD6 325 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 NACA2Q9H009 215 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 ALDH8A1Q9H2A2 487 aaPredicted RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 HMG20AQ9NP66 347 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MAN1B1Q9UKM7 699 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 SH3TC1Q8TE82 1336 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 A6NJR5 290 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 ADAM9Q13443 819 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 SPDYCQ5MJ68 293 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 DEPDC1Q5TB30 811 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 DEPDC1BQ8WUY9 529 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 SKA1Q96BD8 255 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 FRMD8Q9BZ67 464 aaPredicted RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 WDR37Q9Y2I8 494 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 CAMSAP1Q5T5Y3 1602 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 TRIM24O15164 1050 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 PDE9AO76083 593 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 TP53BP2Q13625 1128 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 NANOGNBQ7Z5D8 188 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MYCT1Q8N699 235 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MYCBPAPQ8TBZ2 947 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 SLC26A7Q8TE54 656 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 VAT1LQ9HCJ6 419 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 PRDM11Q9NQV5 511 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 SAMD9LQ8IVG5 1584 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 GOLGA8RI6L899 631 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 OLR1P78380 273 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 KRT26Q7Z3Y9 468 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MAGEB6Q8N7X4 407 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 RASSF5Q8WWW0 418 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MLPHQ9BV36 600 aaPredicted RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 SNX12Q9UMY4 172 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 P4HA2O15460 535 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 JAK2O60674 1132 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 CSTF3Q12996 717 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 USH1GQ495M9 461 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 B3GNT6Q6ZMB0 384 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 STKLD1Q8NE28 680 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 ADARP55265 1226 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 COG4Q9H9E3 785 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 ADAM30Q9UKF2 790 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 NOS1P29475 1434 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 BRAFP15056 766 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 BTN2A1Q7KYR7 527 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 FHOD1Q9Y613 1164 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 EDC4Q6P2E9 1401 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 CA8P35219 290 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 PRR23BQ6ZRT6 265 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 PANK4Q9NVE7 773 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 R3HDM2Q9Y2K5 976 aaKnown RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 NPATQ14207 1427 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 NCOA3Q9Y6Q9 1424 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 GPBP1Q86WP2 473 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 BLIDQ8IZY5 108 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 PCYOX1LQ8NBM8 494 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 MAST3O60307 1309 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
TTC28-208ENST00000612946 RPAP1Q9BWH6 1393 aaPredicted RBP9.33□□□□□ -0.92
TTC28-208ENST00000612946 GPAA1O43292 621 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 CCNE1P24864 410 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 VSNL1P62760 191 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 GABPAQ06546 454 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 FAM26FQ5R3K3 315 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 HP1BP3Q5SSJ5 553 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 TMEM245Q9H330 911 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 ATP8A2Q9NTI2 1148 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 STK36Q9NRP7 1315 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 CALB2P22676 271 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 XIAPP98170 497 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 SPOPLQ6IQ16 392 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 CCNI2Q6ZMN8 369 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 SPATA4Q8NEY3 305 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 SCN3BQ9NY72 215 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms