RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 CALN1Q9BXU9 219 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 PACSIN2Q9UNF0 486 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 RRP15Q9Y3B9 282 aaKnown RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 MAD1L1Q9Y6D9 718 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 A6NJR5 290 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 PODXLO00592 558 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 PSMC4P43686 418 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 DYNLT1P63172 113 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 TRIP13Q15645 432 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SCARA5Q6ZMJ2 495 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 CCDC117Q8IWD4 279 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 CCDC197Q8NCU1 140 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 RILPQ96NA2 401 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 REEP2Q9BRK0 252 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 EMSYQ7Z589 1322 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 BCL9O00512 1426 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SUN1O94901 812 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 ZRANB2O95218 330 aaKnown RBP eCLIP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 FTLP02792 175 aaPredicted RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SLC18A3Q16572 532 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 MAPK6Q16659 721 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 NSMCE1Q8WV22 266 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 TBC1D31Q96DN5 1066 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SAAL1Q96ER3 474 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 RPF1Q9H9Y2 349 aaKnown RBP9.25□□□□□ -0.93
TMCO1-208ENST00000612311 PCDHA10Q9Y5I2 948 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 SCINQ9Y6U3 715 aa9.25□□□□□ -0.93
TMCO1-208ENST00000612311 AK9Q5TCS8 1911 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 RFX1P22670 979 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 IL9RQ01113 521 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 NAA25Q14CX7 972 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 PKN1Q16512 942 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZNF394Q53GI3 561 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ARMC9Q7Z3E5 817 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 SDCCAG8Q86SQ7 713 aaPredicted RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 KSR1Q8IVT5 923 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 C7orf31Q8N865 590 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 LRRC8CQ8TDW0 803 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 IFT122Q9HBG6 1241 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZNRF3Q9ULT6 936 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 COL5A2P05997 1499 aaPredicted RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 MCF2LO15068 1137 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 INHBAP08476 426 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 RPA1P27694 616 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 PCK1P35558 622 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 SOX5P35711 763 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZNF211Q13398 564 aaPredicted RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 NCAPHQ15003 741 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ERICH1Q86X53 443 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 TMEM35BQ8NCS4 154 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 RFFLQ8WZ73 363 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 FAM167AQ96KS9 214 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 NACA2Q9H009 215 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 VCPKMTQ9H867 229 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 CNOT10Q9H9A5 744 aaKnown RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 TRIM10Q9UDY6 481 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 STK38LQ9Y2H1 464 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 SYNJ2BP-COX16A0A087WUM0 186 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 A0A1B0GUA9 196 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 CTIFO43310 598 aaKnown RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 SLC26A4O43511 780 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZBTB7AO95365 584 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZKSCAN8Q15776 578 aaPredicted RBP9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ZNF667Q5HYK9 610 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 OR6B2Q6IFH4 312 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 NME8Q8N427 588 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 RAB3IL1Q8TBN0 382 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 CCHCR1Q8TD31 782 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 FAM151AQ8WW52 585 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 TCP11Q8WWU5 503 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 SH2D3AQ9BRG2 576 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 COX16Q9P0S2 106 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 ODF2LQ9ULJ1 636 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 RICTORQ6R327 1708 aa9.24□□□□□ -0.93
TMCO1-208ENST00000612311 GRID2IPA4D2P6 1211 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 GYS1P13807 737 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 UCHL3P15374 230 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 GGCXP38435 758 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 SLC12A2P55011 1212 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 ADCY1Q08828 1119 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 C3orf67Q6ZVT6 689 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 VGLL2Q8N8G2 317 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 COG1Q8WTW3 980 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 ANKRD7Q92527 254 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 IL17RAQ96F46 866 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 ERGIC2Q96RQ1 377 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 RPS6KC1Q96S38 1066 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.937e-10■■■□□ 14.7
TMCO1-208ENST00000612311 C11orf70Q9BRQ4 267 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 ACAD9Q9H845 621 aa9.23□□□□□ -0.93
TMCO1-208ENST00000612311 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms