RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
CBWD3-208ENST00000612050 U2AF2P26368 475 aaKnown RBP eCLIP13.76□□□□□ -0.21
CBWD3-208ENST00000612050 TECP42680 631 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 TFDP1Q14186 410 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 SPOUT1Q5T280 376 aaKnown RBP13.76□□□□□ -0.21
CBWD3-208ENST00000612050 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
CBWD3-208ENST00000612050 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
CBWD3-208ENST00000612050 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
CBWD3-208ENST00000612050 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-208ENST00000612050 NLRP4Q96MN2 994 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 MTMR9Q96QG7 549 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 OSBPL7Q9BZF2 842 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 ATP6V0A4Q9HBG4 840 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 RGS18Q9NS28 235 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 ANKEF1Q9NU02 776 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
CBWD3-208ENST00000612050 SZT2Q5T011 3432 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 DGAT1O75907 488 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 SLITRK3O94933 977 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 RB1P06400 928 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 SKIP12755 728 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 XRCC6P12956 609 aaKnown RBP eCLIP13.75□□□□□ -0.21
CBWD3-208ENST00000612050 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
CBWD3-208ENST00000612050 CTNNB1P35222 781 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 SPIRE1Q08AE8 756 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-208ENST00000612050 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-208ENST00000612050 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 LINC01465Q8N7H1 131 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 SH2D3AQ9BRG2 576 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 C11orf84Q9BUA3 381 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-208ENST00000612050 CDHR5Q9HBB8 845 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 COL4A3BPQ9Y5P4 624 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 MYO9BQ13459 2157 aa13.75□□□□□ -0.21
CBWD3-208ENST00000612050 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 TMEM150BA6NC51 233 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 POTEMA6NI47 508 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 DGKIO75912 1065 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 LYPLA2O95372 231 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
CBWD3-208ENST00000612050 MUTP22033 750 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 NPEPPSP55786 919 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 GRB10Q13322 594 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 EMC2Q15006 297 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 AAK1Q2M2I8 961 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 EPC2Q52LR7 807 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 CATSPER4Q7RTX7 472 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 TMEM192Q8IY95 271 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 NACC1Q96RE7 527 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 ADAMTS10Q9H324 1103 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 DHX33Q9H6R0 707 aaKnown RBP13.74□□□□□ -0.21
CBWD3-208ENST00000612050 ELAC1Q9H777 363 aaKnown RBP13.74□□□□□ -0.21
CBWD3-208ENST00000612050 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 TMEM161AQ9NX61 479 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 TTC3P53804 2025 aa13.74□□□□□ -0.21
CBWD3-208ENST00000612050 A0A087WZ62 844 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 ERLIN2O94905 339 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 STBD1O95210 358 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PHKA2P46019 1235 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 GPM6BQ13491 265 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 ADGRE1Q14246 886 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 TWF2Q6IBS0 349 aaKnown RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 SRGAP1Q7Z6B7 1085 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 GDPD5Q8WTR4 605 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PPP2R3CQ969Q6 453 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 ZNF668Q96K58 619 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 HSD17B14Q9BPX1 270 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 FDXACB1Q9BRP7 624 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 C17orf80Q9BSJ5 609 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 POLR3CQ9BUI4 534 aaPredicted RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 TMEM60Q9H2L4 133 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 THEGQ9P2T0 379 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 ARID2Q68CP9 1835 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 RFXAPO00287 272 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 BMP15O95972 392 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 HSP90AA1P07900 732 aaKnown RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 RPA1P27694 616 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 CCT6AP40227 531 aaKnown RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 RAB27AP51159 221 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PTGDRQ13258 359 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PDIA5Q14554 519 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PCBP1Q15365 356 aaKnown RBP eCLIP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 CSPP1Q1MSJ5 1256 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 PAN2Q504Q3 1202 aaKnown RBP13.73□□□□□ -0.21
CBWD3-208ENST00000612050 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
CBWD3-208ENST00000612050 NAALADL2Q58DX5 795 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms