RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RAB34Q9BZG1 259 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 TTC3P53804 2025 aa29.04■■■□□ 2.24
VEGFA-226ENST00000611736 GPR182O15218 404 aa29.03■■■□□ 2.24
VEGFA-226ENST00000611736 ARHGEF15O94989 841 aa29.03■■■□□ 2.24
VEGFA-226ENST00000611736 HSP90AA1P07900 732 aaKnown RBP29.03■■■□□ 2.24
VEGFA-226ENST00000611736 RPA1P27694 616 aa29.03■■■□□ 2.24
VEGFA-226ENST00000611736 PRPHP41219 470 aa29.03■■■□□ 2.24
VEGFA-226ENST00000611736 ATP2C1P98194 919 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-226ENST00000611736 HAUS3Q68CZ6 603 aa29.03■■■□□ 2.24
VEGFA-226ENST00000611736 CDX2Q99626 313 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-226ENST00000611736 EIF4BP23588 611 aaKnown RBP29.02■■■□□ 2.24
VEGFA-226ENST00000611736 CCT6AP40227 531 aaKnown RBP29.02■■■□□ 2.24
VEGFA-226ENST00000611736 RARRES1P49788 294 aa29.02■■■□□ 2.24
VEGFA-226ENST00000611736 PDIA5Q14554 519 aa29.02■■■□□ 2.24
VEGFA-226ENST00000611736 ODR4Q5SWX8 454 aa29.02■■■□□ 2.24
VEGFA-226ENST00000611736 RTN4RL1Q86UN2 441 aaPredicted RBP29.02■■■□□ 2.24
VEGFA-226ENST00000611736 KSR1Q8IVT5 923 aa29.02■■■□□ 2.24
VEGFA-226ENST00000611736 IGSF22Q8N9C0 903 aa29.02■■■□□ 2.24
VEGFA-226ENST00000611736 MTRQ99707 1265 aa29.02■■■□□ 2.24
VEGFA-226ENST00000611736 DARSP14868 501 aaKnown RBP29.01■■■□□ 2.23
VEGFA-226ENST00000611736 IBSPP21815 317 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-226ENST00000611736 CDC42EP1Q00587 391 aa29.01■■■□□ 2.23
VEGFA-226ENST00000611736 MYLIPQ8WY64 445 aa29.01■■■□□ 2.23
VEGFA-226ENST00000611736 NLRP4Q96MN2 994 aa29.01■■■□□ 2.23
VEGFA-226ENST00000611736 NACC1Q96RE7 527 aa29.01■■■□□ 2.23
VEGFA-226ENST00000611736 TSPYL2Q9H2G4 693 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-226ENST00000611736 MTMR6Q9Y217 621 aa29.01■■■□□ 2.23
VEGFA-226ENST00000611736 INSL6Q9Y581 213 aa29.01■■■□□ 2.23
VEGFA-226ENST00000611736 A0A087WZ62 844 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 PP2D1A8MPX8 630 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 MGEA5O60502 916 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 CSDE1O75534 798 aaKnown RBP29■■■□□ 2.23
VEGFA-226ENST00000611736 FGFR4P22455 802 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 TAP1Q03518 808 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 RESTQ13127 1097 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 SNX29Q8TEQ0 813 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 PRPF31Q8WWY3 499 aaKnown RBP29■■■□□ 2.23
VEGFA-226ENST00000611736 PSPC1Q8WXF1 523 aaKnown RBP29■■■□□ 2.23
VEGFA-226ENST00000611736 YME1L1Q96TA2 773 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 FDXACB1Q9BRP7 624 aaPredicted RBP29■■■□□ 2.23
VEGFA-226ENST00000611736 GCOM2Q9BZD3 368 aaPredicted RBP29■■■□□ 2.23
VEGFA-226ENST00000611736 CERS4Q9HA82 394 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 COL4A3BPQ9Y5P4 624 aa29■■■□□ 2.23
VEGFA-226ENST00000611736 DENND3A2RUS2 1198 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 STX6O43752 255 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 GAS2O43903 313 aaKnown RBP28.99■■■□□ 2.23
VEGFA-226ENST00000611736 XRCC6P12956 609 aaKnown RBP eCLIP28.99■■■□□ 2.231e-10■□□□□ 8.4
VEGFA-226ENST00000611736 ECM1Q16610 540 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 TCP11Q8WWU5 503 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 ADAM2Q99965 735 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 PRDM12Q9H4Q4 367 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 ATP6V0A4Q9HBG4 840 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 XPNPEP1Q9NQW7 623 aa28.99■■■□□ 2.23
VEGFA-226ENST00000611736 VWA3AA6NCI4 1184 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 USO1O60763 962 aaKnown RBP28.98■■■□□ 2.23
VEGFA-226ENST00000611736 DGAT1O75907 488 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 CDC25AP30304 524 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 HTRA4P83105 476 aaPredicted RBP28.98■■■□□ 2.23
VEGFA-226ENST00000611736 SPRED2Q7Z698 418 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 ZNF410Q86VK4 478 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 SPRYD3Q8NCJ5 442 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 DBR1Q9UK59 544 aaKnown RBP28.98■■■□□ 2.23
VEGFA-226ENST00000611736 STK24Q9Y6E0 443 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 TRANK1O15050 2925 aa28.98■■■□□ 2.23
VEGFA-226ENST00000611736 SRGAP2CP0DJJ0 459 aa28.97■■■□□ 2.23
VEGFA-226ENST00000611736 LAMTOR4Q0VGL1 99 aa28.97■■■□□ 2.23
VEGFA-226ENST00000611736 KRT79Q5XKE5 535 aa28.97■■■□□ 2.23
VEGFA-226ENST00000611736 KIAA1024Q9UPX6 916 aa28.97■■■□□ 2.23
VEGFA-226ENST00000611736 EYSQ5T1H1 3165 aa28.96■■■□□ 2.23
VEGFA-226ENST00000611736 MUTP22033 750 aa28.96■■■□□ 2.23
VEGFA-226ENST00000611736 SF3A1Q15459 793 aaKnown RBP28.96■■■□□ 2.23
VEGFA-226ENST00000611736 ARL6IP4Q66PJ3 421 aaKnown RBP28.96■■■□□ 2.23
VEGFA-226ENST00000611736 FAM173BQ6P4H8 233 aa28.96■■■□□ 2.23
VEGFA-226ENST00000611736 ARNTL2Q8WYA1 636 aa28.96■■■□□ 2.23
VEGFA-226ENST00000611736 DDX19AQ9NUU7 478 aaKnown RBP28.96■■■□□ 2.23
VEGFA-226ENST00000611736 LINC01553A4QN01 128 aa28.95■■■□□ 2.22
VEGFA-226ENST00000611736 ARHGEF35A5YM69 484 aa28.95■■■□□ 2.22
VEGFA-226ENST00000611736 BMP15O95972 392 aa28.95■■■□□ 2.22
VEGFA-226ENST00000611736 MAEAQ7L5Y9 396 aa28.95■■■□□ 2.22
VEGFA-226ENST00000611736 RGS18Q9NS28 235 aa28.95■■■□□ 2.22
VEGFA-226ENST00000611736 FOSL2P15408 326 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 SARSP49591 514 aaKnown RBP28.94■■■□□ 2.22
VEGFA-226ENST00000611736 DSC3Q14574 896 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 ZRSR1Q15695 479 aaKnown RBP28.94■■■□□ 2.22
VEGFA-226ENST00000611736 NPAS4Q8IUM7 802 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 RNF149Q8NC42 400 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 SP7Q8TDD2 431 aaPredicted RBP28.94■■■□□ 2.22
VEGFA-226ENST00000611736 MMTAG2Q9BU76 263 aaKnown RBP28.94■■■□□ 2.22
VEGFA-226ENST00000611736 INO80BQ9C086 356 aaPredicted RBP28.94■■■□□ 2.22
VEGFA-226ENST00000611736 IFT122Q9HBG6 1241 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 C1orf112Q9NSG2 853 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 MTUS1Q9ULD2 1270 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 CLIC4Q9Y696 253 aa28.94■■■□□ 2.22
VEGFA-226ENST00000611736 ASAP2O43150 1006 aa28.93■■■□□ 2.22
VEGFA-226ENST00000611736 ZSCAN20P17040 1043 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-226ENST00000611736 SFPQP23246 707 aaKnown RBP eCLIP28.93■■■□□ 2.22
VEGFA-226ENST00000611736 PADI6Q6TGC4 694 aa28.93■■■□□ 2.22
VEGFA-226ENST00000611736 FAM43BQ6ZT52 329 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-226ENST00000611736 ASAP3Q8TDY4 903 aa28.93■■■□□ 2.22
VEGFA-226ENST00000611736 GAS2L1Q99501 681 aaPredicted RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms