RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 NECTIN1Q15223 517 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 ZNF484Q5JVG2 852 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 CREB3L3Q68CJ9 461 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 CWF19L1Q69YN2 538 aaKnown RBP13.39□□□□□ -0.27
FDPS-220ENST00000611010 SWSAP1Q6NVH7 229 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
FDPS-220ENST00000611010 SLC39A11Q8N1S5 342 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 BCL7CQ8WUZ0 217 aaPredicted RBP13.39□□□□□ -0.27
FDPS-220ENST00000611010 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
FDPS-220ENST00000611010 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
FDPS-220ENST00000611010 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 ARID2Q68CP9 1835 aa13.39□□□□□ -0.27
FDPS-220ENST00000611010 EDIL3O43854 480 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 ZNF862O60290 1169 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 CLASP2O75122 1294 aaKnown RBP13.38□□□□□ -0.27
FDPS-220ENST00000611010 CDC45O75419 566 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 FGFR4P22455 802 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 CDC27P30260 824 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 NBL1P41271 181 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 AP3B2Q13367 1082 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 NIPA1Q7RTP0 329 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
FDPS-220ENST00000611010 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 LRRC71Q8N4P6 559 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 C12orf76Q8N812 135 aaPredicted RBP13.38□□□□□ -0.27
FDPS-220ENST00000611010 AUTS2Q8WXX7 1259 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 LENG9Q96B70 501 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 BARHL2Q9NY43 387 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 ZNF292O60281 2723 aa13.38□□□□□ -0.27
FDPS-220ENST00000611010 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
FDPS-220ENST00000611010 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 SMCO2A6NFE2 343 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 NT5C1B-RDH14C9J2C7 533 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 IPO5O00410 1097 aaKnown RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 B4GALT3O60512 393 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 FOSP01100 380 aaPredicted RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 HOXB8P17481 243 aaPredicted RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 MTMR3Q13615 1198 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 UGCGQ16739 394 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 ZBTB33Q86T24 672 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 TMTC2Q8N394 836 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 HELQQ8TDG4 1101 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 CASP10Q92851 521 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 VN1R3Q9BXE9 311 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 ADAM7Q9H2U9 754 aa13.37□□□□□ -0.27
FDPS-220ENST00000611010 NGRNQ9NPE2 291 aaKnown RBP13.37□□□□□ -0.27
FDPS-220ENST00000611010 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 CYP3A4P08684 503 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 EPCAMP16422 314 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 PPM1AP35813 382 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 GPC3P51654 580 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 DRP2Q13474 957 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 METTL13Q8N6R0 699 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
FDPS-220ENST00000611010 ESYT1Q9BSJ8 1104 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 NR2E1Q9Y466 385 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
FDPS-220ENST00000611010 COL4A3Q01955 1670 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
FDPS-220ENST00000611010 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
FDPS-220ENST00000611010 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.27
FDPS-220ENST00000611010 NUBP1P53384 320 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 BCAR1P56945 870 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 EXOSC10Q01780 885 aaKnown RBP13.35□□□□□ -0.27
FDPS-220ENST00000611010 SMC1AQ14683 1233 aaKnown RBP13.35□□□□□ -0.27
FDPS-220ENST00000611010 RTN1Q16799 776 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 ADCK5Q3MIX3 580 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 RARS2Q5T160 578 aaKnown RBP13.35□□□□□ -0.27
FDPS-220ENST00000611010 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 ZNF746Q6NUN9 644 aaPredicted RBP13.35□□□□□ -0.27
FDPS-220ENST00000611010 FAM43BQ6ZT52 329 aaPredicted RBP13.35□□□□□ -0.27
FDPS-220ENST00000611010 UBALD2Q8IYN6 164 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 RNF169Q8NCN4 708 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
FDPS-220ENST00000611010 hCG_1984214I3L0E3 225 aa13.34□□□□□ -0.27
FDPS-220ENST00000611010 DARSP14868 501 aaKnown RBP13.34□□□□□ -0.27
FDPS-220ENST00000611010 NPR3P17342 541 aa13.34□□□□□ -0.27
FDPS-220ENST00000611010 EIF4BP23588 611 aaKnown RBP13.34□□□□□ -0.27
FDPS-220ENST00000611010 ITIH3Q06033 890 aa13.34□□□□□ -0.27
FDPS-220ENST00000611010 TPRNQ4KMQ1 711 aa13.34□□□□□ -0.27
FDPS-220ENST00000611010 EFCAB12Q6NXP0 572 aa13.34□□□□□ -0.27
FDPS-220ENST00000611010 FRMD5Q7Z6J6 570 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms