RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 BFSP1Q12934 665 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 NAA30Q147X3 362 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 RUFY4Q6ZNE9 571 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 GLYCTKQ8IVS8 523 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CCDC117Q8IWD4 279 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 RIT2Q99578 217 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 AP1M1Q9BXS5 423 aa7.86□□□□□ -1.15
CSDE1-218ENST00000610726 NSRP1Q9H0G5 558 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 AGO2Q9UKV8 859 aaKnown RBP7.86□□□□□ -1.15
CSDE1-218ENST00000610726 CCL15-CCL14A0A0B4J2E2 113 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 ASB14A6NK59 587 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 RSPH10B2B2RC85 870 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PPP1R3GB7ZBB8 358 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PGRMC1O00264 195 aaKnown RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 DYNC1LI2O43237 492 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 STK10O94804 968 aaKnown RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CSPG5O95196 566 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 RSPH10BP0C881 870 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 ACTN1P12814 892 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CD44P16070 742 aaKnown RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 ACOT2P49753 483 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 ZNF157P51786 506 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 SLC7A5Q01650 507 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 MYO1EQ12965 1108 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CCL15Q16663 113 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 KRT39Q6A163 491 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 TWF2Q6IBS0 349 aaKnown RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 OR6B2Q6IFH4 312 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 FAM83AQ86UY5 434 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 MIS12Q9H081 205 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 GAKO14976 1311 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 A0A1W2PQC6 194 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PALMO75781 387 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 KRT15P19012 456 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 DYNLT1P63172 113 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PRKCEQ02156 737 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 SURF1Q15526 300 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 DENND2CQ68D51 928 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 TRIM50Q86XT4 487 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CTAGE3PQ8IX95 158 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 OR6B3Q8NGW1 331 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PLCD4Q9BRC7 762 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 KIAA1586Q9HCI6 787 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 RBAKQ9NYW8 714 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 IVLP07476 585 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CYP11B2P19099 503 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CYP2B6P20813 491 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PPM1FP49593 454 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 SEMA3FQ13275 785 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 NR1I3Q14994 352 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PPP2R5EQ16537 467 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 FAM81BQ96LP2 452 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 CALN1Q9BXU9 219 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 INTS2Q9H0H0 1204 aaKnown RBP7.85□□□□□ -1.15
CSDE1-218ENST00000610726 PPP1R9AQ9ULJ8 1098 aa7.85□□□□□ -1.15
CSDE1-218ENST00000610726 NDUFAB1O14561 156 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 CELF2O95319 508 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 PPFIA1Q13136 1202 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ZNF699Q32M78 642 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 CCDC14Q49A88 953 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 C15orf52Q6ZUT6 534 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 CCDC125Q86Z20 511 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 NME8Q8N427 588 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 KIFC3Q9BVG8 833 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 PARD6BQ9BYG5 372 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 MRPL47Q9HD33 250 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ADAM22Q9P0K1 906 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ODF2LQ9ULJ1 636 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 CAPN11Q9UMQ6 739 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 LRRD1A4D1F6 860 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 H7C0C1 242 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 SSTR3P32745 418 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 SREBF1P36956 1147 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ATP5OP48047 213 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 PLTPP55058 493 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ARHGEF6Q15052 776 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 SGO2Q562F6 1265 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 E4F1Q66K89 784 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 RSRC2Q7L4I2 434 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 FRMD5Q7Z6J6 570 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 RPUSD2Q8IZ73 545 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 LRRC71Q8N4P6 559 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 GMCL1P1Q8NEA9 526 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 TRIM11Q96F44 468 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 C11orf70Q9BRQ4 267 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 MRPL4Q9BYD3 311 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 UNC45AQ9H3U1 944 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ADARB2Q9NS39 739 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 HSPBP1Q9NZL4 362 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 HDAC6Q9UBN7 1215 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 CNOT8Q9UFF9 292 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 INPP5FQ9Y2H2 1132 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 DAAM1Q9Y4D1 1078 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 LTN1O94822 1766 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 PGK2P07205 417 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 SLC9A1P19634 815 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 KLK7P49862 253 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ARPP19P56211 112 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 CCZ1BP86790 482 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms