RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PPP2R2AP63151 447 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 RBBP7Q16576 425 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 DNAJC12Q9UKB3 198 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 CREB3O43889 395 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 TTC30AQ86WT1 665 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 SERPINB13Q9UIV8 391 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 KPNA7A9QM74 516 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 SSTR3P32745 418 aaPredicted RBP13.95□□□□□ -0.18
USP6NL-205ENST00000609104 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 OCM2P0CE71 109 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 OCMP0CE72 109 aaPredicted RBP13.95□□□□□ -0.18
USP6NL-205ENST00000609104 VCPP55072 806 aaKnown RBP13.95□□□□□ -0.18
USP6NL-205ENST00000609104 USPL1Q5W0Q7 1092 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 KRT39Q6A163 491 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 COPRSQ9NQ92 184 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 LRRC14Q15048 493 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 MRPL40Q9NQ50 206 aaKnown RBP13.95□□□□□ -0.18
USP6NL-205ENST00000609104 ZSCAN9O15535 394 aaPredicted RBP13.95□□□□□ -0.18
USP6NL-205ENST00000609104 CASP1P29466 404 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 AP1B1Q10567 949 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 SLC26A7Q8TE54 656 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 OTULINQ96BN8 352 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 GPS1Q13098 491 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 TTC8Q8TAM2 541 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 RNF123Q5XPI4 1314 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 MYO1CO00159 1063 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 CUL4AQ13619 759 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 RASSF3Q86WH2 238 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 KANSL2Q9H9L4 492 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 ELF1P32519 619 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 OSBP2Q969R2 916 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 STOML1Q9UBI4 398 aa13.95□□□□□ -0.18
USP6NL-205ENST00000609104 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 TRIM49BA6NDI0 452 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 MMS22LQ6ZRQ5 1243 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 ANO5Q75V66 913 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 NDUFAF2Q8N183 169 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 CHCHD3Q9NX63 227 aaKnown RBP13.94□□□□□ -0.18
USP6NL-205ENST00000609104 ABCC10Q5T3U5 1492 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 CCNA1P78396 465 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
USP6NL-205ENST00000609104 PARP9Q8IXQ6 854 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 CDV3Q9UKY7 258 aaKnown RBP13.94□□□□□ -0.18
USP6NL-205ENST00000609104 HPCAL4Q9UM19 191 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 PLEKHA8P1O95397 391 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 PSMC1P62191 440 aaKnown RBP13.94□□□□□ -0.18
USP6NL-205ENST00000609104 ZNF211Q13398 564 aaPredicted RBP13.94□□□□□ -0.18
USP6NL-205ENST00000609104 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 PPM1NQ8N819 430 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 BTBD6Q96KE9 485 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 RANBP1P43487 201 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 NEK2P51955 445 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 TAGAPQ8N103 731 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 RBM41Q96IZ5 413 aaKnown RBP13.94□□□□□ -0.18
USP6NL-205ENST00000609104 CYP26B1Q9NR63 512 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 ERFEQ4G0M1 354 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 ZNF711Q9Y462 761 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 FAM95CA0A1B0GW59 222 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 E5RI56 91 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 PRCPP42785 496 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 USP14P54578 494 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 RAD23BP54727 409 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 AGR3Q8TD06 166 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 PTPRTO14522 1441 aa13.94□□□□□ -0.18
USP6NL-205ENST00000609104 NUP85Q9BW27 656 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 SLFN12LQ6IEE8 588 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 CDC37Q16543 378 aaPredicted RBP13.93□□□□□ -0.18
USP6NL-205ENST00000609104 NBPF10Q6P3W6 841 aaKnown RBP13.93□□□□□ -0.18
USP6NL-205ENST00000609104 ULK4Q96C45 1275 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 ARHGEF37A1IGU5 675 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 EIF2AK2P19525 551 aaKnown RBP13.93□□□□□ -0.18
USP6NL-205ENST00000609104 LRRC8EQ6NSJ5 796 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 KRT4P19013 534 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 NFRKBQ6P4R8 1299 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 CCNYL1Q8N7R7 359 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 PI4KBQ9UBF8 816 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.184e-7■□□□□ 8.7
USP6NL-205ENST00000609104 CRKLP46109 303 aaKnown RBP13.93□□□□□ -0.18
USP6NL-205ENST00000609104 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
USP6NL-205ENST00000609104 EDEM3Q9BZQ6 932 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 CEP72Q9P209 647 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 CCDC159P0C7I6 412 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 THEM5Q8N1Q8 247 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 ASNSD1Q9NWL6 643 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 KRT38O76015 456 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 IFNAR1P17181 557 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 CAV1Q03135 178 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 OSBPL1AQ9BXW6 950 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 ASPSCR1Q9BZE9 553 aa13.93□□□□□ -0.18
USP6NL-205ENST00000609104 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
USP6NL-205ENST00000609104 HDAC4P56524 1084 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms