RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, human

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-215	ENST00000608158	TAF1C	Q15572	869 aa	Predicted RBP	18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	E4F1	Q66K89	784 aa	Predicted RBP	18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	HAUS6	Q7Z4H7	955 aa		18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	DHX37	Q8IY37	1157 aa	Known RBP	18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	RETREG2	Q8NC44	543 aa		18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	COPS5	Q92905	334 aa		18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	NUP58	Q9BVL2	599 aa		18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	TMEM206	Q9H813	350 aa		18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	FAM184B	Q9ULE4	1060 aa		18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	DIS3	Q9Y2L1	958 aa	Known RBP	18.2	■□□□□ 0.5
CTCFL-215	ENST00000608158	USP27X	A6NNY8	438 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	SLC16A4	O15374	487 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	LGR5	O75473	907 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	TRIM21	P19474	475 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	NPTX2	P47972	431 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	CASP4	P49662	377 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	POLG	P54098	1239 aa	Predicted RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	RTP1	P59025	263 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	GTF2B	Q00403	316 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	FIGN	Q5HY92	759 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	SYCP3	Q8IZU3	236 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	CCAR2	Q8N163	923 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	SPIRE2	Q8WWL2	714 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	SPATA33	Q96N06	139 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	ACCS	Q96QU6	501 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	NIFK	Q9BYG3	293 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	AZI2	Q9H6S1	392 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	TLL2	Q9Y6L7	1015 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	EMSY	Q7Z589	1322 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	MYH9	P35579	1960 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	RASSF10	A6NK89	507 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	KRT9	P35527	623 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	TMEM63B	Q5T3F8	832 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	MAMDC4	Q6UXC1	1216 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	DPP9	Q86TI2	863 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	TRIM50	Q86XT4	487 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	TMEM161B	Q8NDZ6	487 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	HVCN1	Q96D96	273 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	MAML3	Q96JK9	1138 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	FAM167A	Q96KS9	214 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	KIFC3	Q9BVG8	833 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	NAA15	Q9BXJ9	866 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	KATNBL1	Q9H079	304 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	DHX33	Q9H6R0	707 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	METTL14	Q9HCE5	456 aa	Known RBP	18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	CAPN11	Q9UMQ6	739 aa		18.19	■□□□□ 0.5
CTCFL-215	ENST00000608158	SLC15A5	A6NIM6	579 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	CCDC169	A6NNP5	214 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	SMTN	P53814	917 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	TAPT1	Q6NXT6	567 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	IQCD	Q96DY2	449 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	CEP89	Q96ST8	783 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	MKNK1	Q9BUB5	465 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	KMT5A	Q9NQR1	393 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	DMAC2	Q9NW81	257 aa		18.18	■□□□□ 0.5
CTCFL-215	ENST00000608158	OFD1	O75665	1012 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	PPP2R3A	Q06190	1150 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	TARBP2	Q15633	366 aa	Known RBP	18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	IFNL1	Q8IU54	200 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	SLC9A9	Q8IVB4	645 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	LUC7L2	Q9Y383	392 aa	Known RBP	18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	ADGRA3	Q8IWK6	1321 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158		A0A1W2PQJ5	194 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	RBM47	A0AV96	593 aa	Known RBP	18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	FAM155A	B1AL88	458 aa	Predicted RBP	18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	XRCC5	P13010	732 aa	Known RBP	18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	RFC5	P40937	340 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	CYP2J2	P51589	502 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	ARHGAP1	Q07960	439 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	MYBPC2	Q14324	1141 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	MAP4K3	Q8IVH8	894 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	C12orf56	Q8IXR9	622 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	FAM186B	Q8IYM0	893 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	CCDC155	Q8N6L0	562 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	SLC7A3	Q8WY07	619 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	GLG1	Q92896	1179 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	DNAJC7	Q99615	494 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	NRBP2	Q9NSY0	501 aa		18.17	■□□□□ 0.5
CTCFL-215	ENST00000608158	SOWAHD	A6NJG2	315 aa		18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	SNAI1	O95863	264 aa	Predicted RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	PSMC2	P35998	433 aa	Known RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	BORCS6	Q96GS4	357 aa		18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	IFT74	Q96LB3	600 aa		18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	NTPCR	Q9BSD7	190 aa	Known RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	TRMT1	Q9NXH9	659 aa	Known RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	CGN	Q9P2M7	1197 aa	Known RBP	18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	PPME1	Q9Y570	386 aa		18.16	■□□□□ 0.5
CTCFL-215	ENST00000608158	DENND3	A2RUS2	1198 aa		18.15	■□□□□ 0.5
CTCFL-215	ENST00000608158	TISP43	B9A030	160 aa		18.15	■□□□□ 0.5
CTCFL-215	ENST00000608158	EPHB6	O15197	1021 aa		18.15	■□□□□ 0.5
CTCFL-215	ENST00000608158	MARK3	P27448	753 aa		18.15	■□□□□ 0.5
CTCFL-215	ENST00000608158	KCNH2	Q12809	1159 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms