RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CMPK2Q5EBM0 449 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 NT5DC1Q5TFE4 455 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 EFCAB2Q5VUJ9 269 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TCERG1LQ5VWI1 586 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 PAPD7Q5XG87 772 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SLC6A19Q695T7 634 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 KDM7AQ6ZMT4 941 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ARMC9Q7Z3E5 817 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 FERMT3Q86UX7 667 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM228AQ86W67 206 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SPPL2CQ8IUH8 684 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TMTC1Q8IUR5 882 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 RBM12BQ8IXT5 1001 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 MMGT1Q8N4V1 131 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TEX9Q8N6V9 391 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 NECAB1Q8N987 351 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 EIF1ADQ8N9N8 165 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 FSIP1Q8NA03 581 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 LINC00301Q8NCQ3 95 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ANKRD24Q8TF21 1146 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 AENQ8WTP8 325 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 BRF1Q92994 677 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 RELTQ969Z4 430 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC47Q96A33 483 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 RSRC1Q96IZ7 334 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TMEM87BQ96K49 555 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SETDB2Q96T68 719 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 NAPGQ99747 312 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CD248Q9HCU0 757 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SLC40A1Q9NP59 571 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 GOLGA6AQ9NYA3 693 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM184BQ9ULE4 1060 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 PCDHA7Q9UN72 937 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 HPSEQ9Y251 543 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 RPS6KL1Q9Y6S9 549 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ATP7BP35670 1465 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ANKARQ7Z5J8 1434 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 UGGT1Q9NYU2 1555 aa4.53□□□□□ -1.69
HMGB1P50-201ENST00000605814 A0A1W2PP64 1363 aa4.53□□□□□ -1.69
HMGB1P50-201ENST00000605814 ARHGAP5Q13017 1502 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 ITIH6Q6UXX5 1313 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 SH3TC1Q8TE82 1336 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 PNMA6EA0A0J9YXQ4 647 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 C5orf60A6NFR6 353 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 AKR1B15C9JRZ8 316 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 H3BQV1 296 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 MYO1FO00160 1098 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 ELL2O00472 640 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 PSMD14O00487 310 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 PPP6R2O75170 966 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 FAM107AO95990 144 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 SERPINC1P01008 464 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 GSTA1P08263 222 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 IMPDH2P12268 514 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 HOXA5P20719 270 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 ERCC5P28715 1186 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 PBX1P40424 430 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CDK8P49336 464 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 RAB27AP51159 221 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 RPS26P62854 115 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 GNGT1P63211 74 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 ROR2Q01974 943 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CHRNEQ04844 493 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 FMR1Q06787 632 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CLEC16AQ2KHT3 1053 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 GLE1Q53GS7 698 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 TTC19Q6DKK2 380 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CYB5D1Q6P9G0 228 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 EMBQ6PCB8 327 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 MTHFD1LQ6UB35 978 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 SYNE3Q6ZMZ3 975 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRAPPC11Q7Z392 1133 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 HDGFL2Q7Z4V5 671 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 MRPL41Q8IXM3 137 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 RPUSD2Q8IZ73 545 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 IQCKQ8N0W5 287 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRIML1Q8N9V2 468 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 MLKLQ8NB16 471 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 TRIM58Q8NG06 486 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CFAP61Q8NHU2 1237 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 DPF2Q92785 391 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CAVIN3Q969G5 261 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZNF274Q96GC6 653 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 FRMD6Q96NE9 622 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 USP28Q96RU2 1077 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CRACR2AQ9BSW2 395 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 MMTAG2Q9BU76 263 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 USP44Q9H0E7 712 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 PARD6AQ9NPB6 346 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 CHCHD3Q9NX63 227 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 TJP2Q9UDY2 1190 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 ANAPC4Q9UJX5 808 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 WWC3Q9ULE0 1092 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 RBM8AQ9Y5S9 174 aaKnown RBP4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 TACC3Q9Y6A5 838 aa4.52□□□□□ -1.69
HMGB1P50-201ENST00000605814 UBN2Q6ZU65 1347 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 SALL1Q9NSC2 1324 aa4.51□□□□□ -1.69
HMGB1P50-201ENST00000605814 GOLGA6BA6NDN3 693 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms