RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZFHX4Q86UP3 3567 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 COL1A2P08123 1366 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 IGKV6D-21A0A0A0MT36 114 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 E7EWF7 191 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 DDX39AO00148 427 aaKnown RBP13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 GPR32O75388 356 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KRT37O76014 449 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ATG7O95352 703 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 RFX1P22670 979 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SMARCA1P28370 1054 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 BCAR1P56945 870 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PUM1Q14671 1186 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CEP55Q53EZ4 464 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CHD1LQ86WJ1 897 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 RIN2Q8WYP3 895 aaPredicted RBP13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PGBD1Q96JS3 809 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZBP1Q9H171 429 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KCNK12Q9HB15 430 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZNF302Q9NR11 478 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CHD8Q9HCK8 2581 aa13.4□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CHD6Q8TD26 2715 aa13.4□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SPTBN2O15020 2390 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 OTOGLQ3ZCN5 2332 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 STK25O00506 426 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 NARSO43776 548 aaKnown RBP13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 RXRAP19793 462 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 GNAQP50148 359 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CLCN3P51790 818 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ABHD15Q6UXT9 468 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 TMEM173Q86WV6 379 aaPredicted RBP13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SLC22A17Q8WUG5 538 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 MRPL9Q9BYD2 267 aaKnown RBP13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SFXN1Q9H9B4 322 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 DOCK5Q9H7D0 1870 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 MYH6P13533 1939 aa13.39□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ZC3H11AO75152 810 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CFHP08603 1231 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ATP4AP20648 1035 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 PTH1RQ03431 593 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SWSAP1Q6NVH7 229 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 NFXL1Q6ZNB6 911 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SMC5Q8IY18 1101 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CACNA1GO43497 2377 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 A0A0U1RQF3 1178 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 MEIS1O00470 390 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CTSAP10619 480 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ZNF598Q86UK7 904 aaKnown RBP13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 RUBCNQ92622 972 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ZNF668Q96K58 619 aaPredicted RBP13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 MAP7D2Q96T17 732 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 DLL3Q9NYJ7 618 aa13.37□□□□□ -0.27
PDLIM1P1-201ENST00000604187 KRBA1A5PL33 1030 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 FGFR4P22455 802 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 EIF4BP23588 611 aaKnown RBP13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 NUCB1Q02818 461 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 GIT2Q14161 759 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 PTPN14Q15678 1187 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 LETM2Q2VYF4 491 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ZC3H14Q6PJT7 736 aaKnown RBP13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 PPFIBP1Q86W92 1011 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 DCLK2Q8N568 766 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 IGSF21Q96ID5 467 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 WNT16Q9UBV4 365 aa13.36□□□□□ -0.27
PDLIM1P1-201ENST00000604187 CA14Q9ULX7 337 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms