RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 HOXA2O43364 376 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 FGF18O76093 207 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 TDP2O95551 362 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 FGFR1P11362 822 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 PLA2G5P39877 138 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 NRIP1P48552 1158 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 NDUFV1P49821 464 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 GPC3P51654 580 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 STK3Q13188 491 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 COLGALT1Q8NBJ5 622 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 MICAL1Q8TDZ2 1067 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 MSLNLQ96KJ4 702 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 AIFM3Q96NN9 605 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 POP1Q99575 1024 aaKnown RBP19.14■□□□□ 0.65
SCAF1-204ENST00000601038 TMEM117Q9H0C3 514 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 CWH43Q9H720 699 aa19.14■□□□□ 0.65
SCAF1-204ENST00000601038 PRR33A8MZF0 331 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 DCXO43602 365 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 EYA4O95677 639 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 DARSP14868 501 aaKnown RBP19.13■□□□□ 0.65
SCAF1-204ENST00000601038 LAG3P18627 525 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 CDC42EP1Q00587 391 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 NONOQ15233 471 aaKnown RBP eCLIP19.13■□□□□ 0.65
SCAF1-204ENST00000601038 XKR3Q5GH77 459 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 PDE12Q6L8Q7 609 aaKnown RBP19.13■□□□□ 0.65
SCAF1-204ENST00000601038 KRT25Q7Z3Z0 450 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 RBM23Q86U06 439 aaKnown RBP19.13■□□□□ 0.65
SCAF1-204ENST00000601038 THNSL1Q8IYQ7 743 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 ETNPPLQ8TBG4 499 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 FAM122AQ96E09 287 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 CASD1Q96PB1 797 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 TLE6Q9H808 572 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 TLR9Q9NR96 1032 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 CLEC1BQ9P126 229 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 HCSTQ9UBK5 93 aa19.13■□□□□ 0.65
SCAF1-204ENST00000601038 PLXNA4Q9HCM2 1894 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 STBD1O95210 358 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 COASYQ13057 564 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 ECHDC2Q86YB7 292 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 ZNF668Q96K58 619 aaPredicted RBP19.12■□□□□ 0.65
SCAF1-204ENST00000601038 SCLT1Q96NL6 688 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 CEP89Q96ST8 783 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 RNF19AQ9NV58 838 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 LZTS1Q9Y250 596 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 PCDHGC5Q9Y5F6 944 aa19.12■□□□□ 0.65
SCAF1-204ENST00000601038 IGKV6-21A0A0C4DH24 114 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 A0A0U1RQF3 1178 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 CDKL5O76039 1030 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 ERVFC1P60507 584 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 PLCB3Q01970 1234 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 INF2Q27J81 1249 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 MTERF2Q49AM1 385 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 LRRC55Q6ZSA7 311 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 ABI1Q8IZP0 508 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 SMRP1Q8NCR6 262 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 NLRP7Q8WX94 980 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 DACT1Q9NYF0 836 aa19.11■□□□□ 0.65
SCAF1-204ENST00000601038 SEPT9Q9UHD8 586 aaPredicted RBP19.11■□□□□ 0.65
SCAF1-204ENST00000601038 DDX25Q9UHL0 483 aaKnown RBP19.11■□□□□ 0.65
SCAF1-204ENST00000601038 FSD2A1L4K1 749 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 FSCN2O14926 492 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 GLP2RO95838 553 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 EOMESO95936 686 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 DNM2P50570 870 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 PSMC5P62195 406 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 SCRN1Q12765 414 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 DRP2Q13474 957 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 LRRC43Q8N309 656 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 CDCA3Q99618 268 aaPredicted RBP19.1■□□□□ 0.65
SCAF1-204ENST00000601038 PHF20Q9BVI0 1012 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 GCOM2Q9BZD3 368 aaPredicted RBP19.1■□□□□ 0.65
SCAF1-204ENST00000601038 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
SCAF1-204ENST00000601038 PUF60Q9UHX1 559 aaKnown RBP19.1■□□□□ 0.65
SCAF1-204ENST00000601038 KCNJ14Q9UNX9 436 aa19.1■□□□□ 0.65
SCAF1-204ENST00000601038 CCDC194A0A1B0GVG4 234 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 TMEM150BA6NC51 233 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 DDX11L8A8MPP1 907 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 PER2O15055 1255 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 SLC37A4O43826 429 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 XBP1P17861 261 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 FGFR4P22455 802 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 LETM2Q2VYF4 491 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 KCNT2Q6UVM3 1135 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 ZNF598Q86UK7 904 aaKnown RBP19.09■□□□□ 0.65
SCAF1-204ENST00000601038 MRPS27Q92552 414 aaKnown RBP19.09■□□□□ 0.65
SCAF1-204ENST00000601038 FAM20AQ96MK3 541 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 CHST12Q9NRB3 414 aa19.09■□□□□ 0.65
SCAF1-204ENST00000601038 BARX2Q9UMQ3 279 aaPredicted RBP19.09■□□□□ 0.65
SCAF1-204ENST00000601038 STK36Q9NRP7 1315 aa19.08■□□□□ 0.65
SCAF1-204ENST00000601038 PFKFB2O60825 505 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 MAFO75444 373 aaPredicted RBP19.08■□□□□ 0.64
SCAF1-204ENST00000601038 CSDE1O75534 798 aaKnown RBP19.08■□□□□ 0.64
SCAF1-204ENST00000601038 PPM1AP35813 382 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 KRT17Q04695 432 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 PPP2R5CQ13362 524 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 DUSP6Q16828 381 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 CLLU1OSQ5K130 101 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 PPP4R3AQ6IN85 833 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 ANO5Q75V66 913 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 RNF169Q8NCN4 708 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms