RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 ATP6V0A4Q9HBG4 840 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 HCSTQ9UBK5 93 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 VAV3Q9UKW4 847 aa16.91■□□□□ 0.3
SHKBP1-226ENST00000600791 EML1O00423 815 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 GCFC2P16383 781 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 COL9A1P20849 921 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 GTF2F1P35269 517 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 IRS1P35568 1242 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 DLX2Q07687 328 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 PPP4R3AQ6IN85 833 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 PIK3AP1Q6ZUJ8 805 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 POF1BQ8WVV4 589 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 NLRP7Q8WX94 980 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 SCLT1Q96NL6 688 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 C1QTNF1Q9BXJ1 281 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 EPHX3Q9H6B9 360 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 KCNMB3Q9NPA1 279 aa16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-226ENST00000600791 IGKV6-21A0A0C4DH24 114 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 TBX10O75333 385 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 LARGE1O95461 756 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 FGFR4P22455 802 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 PSMC5P62195 406 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 PPP2R5CQ13362 524 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 EARS2Q5JPH6 523 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 SPOUT1Q5T280 376 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 ADGRD2Q7Z7M1 963 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 NECAB1Q8N987 351 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 FAM20AQ96MK3 541 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 IGFLR1Q9H665 355 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 TYW1Q9NV66 732 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
SHKBP1-226ENST00000600791 DDX11L8A8MPP1 907 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 LINC01565O15544 149 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 CCNT1O60563 726 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 FDPSP14324 419 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 ZSCAN20P17040 1043 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 ME3Q16798 604 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 PLA2G4FQ68DD2 849 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 ANO5Q75V66 913 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 GJD3Q8N144 294 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 COLGALT1Q8NBJ5 622 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 WASF1Q92558 559 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 GTF3C6Q969F1 213 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 PPP2R3CQ969Q6 453 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 CWH43Q9H720 699 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 RNF19AQ9NV58 838 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
SHKBP1-226ENST00000600791 FAM205CA6NFA0 338 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 TBX3O15119 743 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 HOXA2O43364 376 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 MAFO75444 373 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 CSDE1O75534 798 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 QARSP47897 775 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 UBE3AQ05086 875 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 NR5A1Q13285 461 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 CLUL1Q15846 466 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 ECHDC2Q86YB7 292 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 HAS1Q92839 578 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 CASD1Q96PB1 797 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 NAP1L4Q99733 375 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 FAM50BQ9Y247 325 aa16.87■□□□□ 0.29
SHKBP1-226ENST00000600791 A0A087WZ62 844 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 FGF18O76093 207 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 LAG3P18627 525 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 SSTR3P32745 418 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 KRT2P35908 639 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 DNM2P50570 870 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 ZP2Q05996 745 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 ADAM15Q13444 863 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 LRRC55Q6ZSA7 311 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 THNSL1Q8IYQ7 743 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 LRRC43Q8N309 656 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 RNF169Q8NCN4 708 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 NSUN7Q8NE18 718 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 FDXACB1Q9BRP7 624 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 GCOM2Q9BZD3 368 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 CYP26B1Q9NR63 512 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 TLR9Q9NR96 1032 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 SUCLA2Q9P2R7 463 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 RAPGEFL1Q9UHV5 662 aa16.86■□□□□ 0.29
SHKBP1-226ENST00000600791 A0A0U1RQF3 1178 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 MBTPS2O43462 519 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 P4HBP07237 508 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 ATF7P17544 494 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 NRIP1P48552 1158 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 NDUFV1P49821 464 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 NPEPPSP55786 919 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 CDC42EP1Q00587 391 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 CLLU1OSQ5K130 101 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 ZNF598Q86UK7 904 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 RHPN2Q8IUC4 686 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms