RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 MAFO75444 373 aaPredicted RBP17.74■□□□□ 0.43
VRK3-221ENST00000600284 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
VRK3-221ENST00000600284 ITGB1P05556 798 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 P4HBP07237 508 aaKnown RBP17.74■□□□□ 0.43
VRK3-221ENST00000600284 KRT2P35908 639 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 GATMP50440 423 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 CAMK1Q14012 370 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 CSPP1Q1MSJ5 1256 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 CTC1Q2NKJ3 1217 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 ANO5Q75V66 913 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 SLFN12Q8IYM2 578 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 KLHL23Q8NBE8 558 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 NLRP7Q8WX94 980 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 HAS1Q92839 578 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 PPP2R3CQ969Q6 453 aa17.74■□□□□ 0.43
VRK3-221ENST00000600284 GCOM2Q9BZD3 368 aaPredicted RBP17.74■□□□□ 0.43
VRK3-221ENST00000600284 INO80BQ9C086 356 aaPredicted RBP17.74■□□□□ 0.43
VRK3-221ENST00000600284 BRWD1Q9NSI6 2320 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 GRXCR2A6NFK2 248 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 EML1O00423 815 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 MARCH6O60337 910 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 UBE3AQ05086 875 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 EPHA7Q15375 998 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 FAM102BQ5T8I3 360 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 PTCRAQ6ISU1 281 aaPredicted RBP17.73■□□□□ 0.43
VRK3-221ENST00000600284 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 NSUN7Q8NE18 718 aaKnown RBP17.73■□□□□ 0.43
VRK3-221ENST00000600284 TNFRSF25Q93038 417 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 SCLT1Q96NL6 688 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 TMEM117Q9H0C3 514 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 CHST12Q9NRB3 414 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 DACT1Q9NYF0 836 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
VRK3-221ENST00000600284 LARGE1O95461 756 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 EOMESO95936 686 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
VRK3-221ENST00000600284 HYAL1Q12794 435 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 NR5A1Q13285 461 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 EARS2Q5JPH6 523 aaKnown RBP17.72■□□□□ 0.43
VRK3-221ENST00000600284 SPOUT1Q5T280 376 aaKnown RBP17.72■□□□□ 0.43
VRK3-221ENST00000600284 FAM178BQ8IXR5 827 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 C4orf19Q8IY42 314 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 POF1BQ8WVV4 589 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 C1QTNF1Q9BXJ1 281 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 CYP26B1Q9NR63 512 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 TYW1Q9NV66 732 aaKnown RBP17.72■□□□□ 0.43
VRK3-221ENST00000600284 CLDND1Q9NY35 253 aa17.72■□□□□ 0.43
VRK3-221ENST00000600284 SUCLA2Q9P2R7 463 aaPredicted RBP17.72■□□□□ 0.43
VRK3-221ENST00000600284 A0A0U1RQF3 1178 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 TMEM150BA6NC51 233 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 SEC24BO95487 1268 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 DNAJB1P25685 340 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 DRP2Q13474 957 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 TRIM29Q14134 588 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 OTUD6AQ7L8S5 288 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 ECHDC2Q86YB7 292 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 SLC7A3Q8WY07 619 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 RSPH1Q8WYR4 309 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 TRAIPQ9BWF2 469 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 CWH43Q9H720 699 aa17.71■□□□□ 0.43
VRK3-221ENST00000600284 A0A087WZ62 844 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 H3BQ06 376 aaPredicted RBP17.7■□□□□ 0.42
VRK3-221ENST00000600284 DTNBO60941 627 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 FGFR1P11362 822 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 LAG3P18627 525 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
VRK3-221ENST00000600284 LTBRP36941 435 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 SPIRE1Q08AE8 756 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 ADAM15Q13444 863 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 PDE12Q6L8Q7 609 aaKnown RBP17.7■□□□□ 0.42
VRK3-221ENST00000600284 EP400NLQ6ZTU2 488 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 ZNF668Q96K58 619 aaPredicted RBP17.7■□□□□ 0.42
VRK3-221ENST00000600284 CASD1Q96PB1 797 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 SH2D3AQ9BRG2 576 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 FDXACB1Q9BRP7 624 aaPredicted RBP17.7■□□□□ 0.42
VRK3-221ENST00000600284 ZSWIM4Q9H7M6 989 aa17.7■□□□□ 0.42
VRK3-221ENST00000600284 BDP1A6H8Y1 2624 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 FNDC1Q4ZHG4 1894 aaPredicted RBP17.69■□□□□ 0.42
VRK3-221ENST00000600284 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 GAS2O43903 313 aaKnown RBP17.69■□□□□ 0.42
VRK3-221ENST00000600284 FGF18O76093 207 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 SKIP12755 728 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 IL9P15248 144 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 RFC5P40937 340 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 ZNF598Q86UK7 904 aaKnown RBP17.69■□□□□ 0.42
VRK3-221ENST00000600284 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
VRK3-221ENST00000600284 ABI1Q8IZP0 508 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 CEP170P1Q96L14 293 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 LXNQ9BS40 222 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
VRK3-221ENST00000600284 RNF19AQ9NV58 838 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 PRKAG3Q9UGI9 489 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 PCDHA12Q9UN75 941 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
VRK3-221ENST00000600284 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms