RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 ZNF292O60281 2723 aa6.95□□□□□ -1.3
VRK3-220ENST00000600259 MYO10Q9HD67 2058 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 KMT2EQ8IZD2 1858 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 A0A0U1RQF3 1178 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 BACH1O14867 736 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 STBD1O95210 358 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 EOMESO95936 686 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 CIITAP33076 1130 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 ADD1P35611 737 aaKnown RBP6.94□□□□□ -1.3
VRK3-220ENST00000600259 NBL1P41271 181 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 CLCN3P51790 818 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 ADCY7P51828 1080 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 NAPAP54920 295 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 NLRP11P59045 1033 aaKnown RBP6.94□□□□□ -1.3
VRK3-220ENST00000600259 TARBP2Q15633 366 aaKnown RBP6.94□□□□□ -1.3
VRK3-220ENST00000600259 TSGA10IPQ3SY00 556 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 JAKMIP3Q5VZ66 844 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 ZNF746Q6NUN9 644 aaPredicted RBP6.94□□□□□ -1.3
VRK3-220ENST00000600259 EFCAB12Q6NXP0 572 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 MIS18BP1Q6P0N0 1132 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 LLGL2Q6P1M3 1020 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 TMC7Q7Z402 723 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 MICU3Q86XE3 530 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 UBALD2Q8IYN6 164 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 RASEFQ8IZ41 740 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 ZDHHC14Q8IZN3 488 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 C12orf76Q8N812 135 aaPredicted RBP6.94□□□□□ -1.3
VRK3-220ENST00000600259 CASP10Q92851 521 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 ATOH1Q92858 354 aaPredicted RBP6.94□□□□□ -1.3
VRK3-220ENST00000600259 ZNF558Q96NG5 402 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 IRF2BPLQ9H1B7 796 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 TBC1D22BQ9NU19 505 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 SORCS3Q9UPU3 1222 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 PCDHA10Q9Y5I2 948 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 VPS13AQ96RL7 3174 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 CACNA1AO00555 2505 aa6.94□□□□□ -1.3
VRK3-220ENST00000600259 EP300Q09472 2414 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 LOXHD1Q8IVV2 1947 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ESYT2A0FGR8 921 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 PRR23AA6NEV1 266 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 NT5C1B-RDH14C9J2C7 533 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 hCG_1984214I3L0E3 225 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 MAGEB2O15479 319 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 HOXA2O43364 376 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 LILRB3O75022 631 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 CXCL14O95715 111 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ASGR2P07307 311 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 WEE2P0C1S8 567 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 DARSP14868 501 aaKnown RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 NPR3P17342 541 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 FGFR4P22455 802 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 SP100P23497 879 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 PPM1AP35813 382 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZNF76P36508 570 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 GPC3P51654 580 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 CLCN5P51795 746 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 KRT17Q04695 432 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ITIH3Q06033 890 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 DRP2Q13474 957 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 PFKFB3Q16875 520 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 ADCK5Q3MIX3 580 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 TPRNQ4KMQ1 711 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 B3GNT9Q6UX72 402 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 TMEM173Q86WV6 379 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZNF710Q8N1W2 664 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 LRRC71Q8N4P6 559 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 METTL13Q8N6R0 699 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZNF713Q8N859 430 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 BCL7CQ8WUZ0 217 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZNF668Q96K58 619 aaPredicted RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 TCEANC2Q96MN5 208 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 NECTIN4Q96NY8 510 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZNF577Q9BSK1 485 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 VN1R3Q9BXE9 311 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZMYND12Q9H0C1 365 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ZBP1Q9H171 429 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 GLT8D2Q9H1C3 349 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 ENTPD7Q9NQZ7 604 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 RBM28Q9NW13 759 aaKnown RBP6.93□□□□□ -1.3
VRK3-220ENST00000600259 GABBR1Q9UBS5 961 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 LIMD1Q9UGP4 676 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 NR2E1Q9Y466 385 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 PLXNA3P51805 1871 aa6.93□□□□□ -1.3
VRK3-220ENST00000600259 IGKV6-21A0A0C4DH24 114 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 MEIS3P2A8K0S8 358 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 ZBTB43O43298 467 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 PI15O43692 258 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 B4GALT3O60512 393 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 ZNF623O75123 536 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 CSDE1O75534 798 aaKnown RBP6.92□□□□□ -1.3
VRK3-220ENST00000600259 PSAPP07602 524 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 GALTP07902 379 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 SRGAP2BP0DMP2 458 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 CTSAP10619 480 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 EPCAMP16422 314 aa6.92□□□□□ -1.3
VRK3-220ENST00000600259 ZSCAN20P17040 1043 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms