RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 PRRC2BQ5JSZ5 2229 aaKnown RBP31.48■■■□□ 2.63
ZNF558-206ENST00000599938 ADGRA3Q8IWK6 1321 aa31.48■■■□□ 2.63
ZNF558-206ENST00000599938 RFC5P40937 340 aa31.47■■■□□ 2.63
ZNF558-206ENST00000599938 XKR9Q5GH70 373 aa31.47■■■□□ 2.63
ZNF558-206ENST00000599938 MICALL1Q8N3F8 863 aa31.47■■■□□ 2.63
ZNF558-206ENST00000599938 PPM1EQ8WY54 764 aa31.47■■■□□ 2.63
ZNF558-206ENST00000599938 ADAM2Q99965 735 aa31.47■■■□□ 2.63
ZNF558-206ENST00000599938 RC3H2Q9HBD1 1191 aaKnown RBP31.47■■■□□ 2.63
ZNF558-206ENST00000599938 BMP2KQ9NSY1 1161 aaPredicted RBP31.47■■■□□ 2.63
ZNF558-206ENST00000599938 DARSP14868 501 aaKnown RBP31.46■■■□□ 2.63
ZNF558-206ENST00000599938 CDC42EP1Q00587 391 aa31.46■■■□□ 2.63
ZNF558-206ENST00000599938 GRB10Q13322 594 aa31.46■■■□□ 2.63
ZNF558-206ENST00000599938 RHPN2Q8IUC4 686 aa31.46■■■□□ 2.63
ZNF558-206ENST00000599938 EXOC8Q8IYI6 725 aa31.46■■■□□ 2.63
ZNF558-206ENST00000599938 DHX33Q9H6R0 707 aaKnown RBP31.46■■■□□ 2.63
ZNF558-206ENST00000599938 C1orf112Q9NSG2 853 aa31.46■■■□□ 2.63
ZNF558-206ENST00000599938 NLRC5Q86WI3 1866 aa31.46■■■□□ 2.63
ZNF558-206ENST00000599938 ZBTB39O15060 712 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 LYPLA2O95372 231 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 STAG3L1P0CL83 205 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 TECP42680 631 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 SARSP49591 514 aaKnown RBP31.45■■■□□ 2.63
ZNF558-206ENST00000599938 EMC2Q15006 297 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 FIBCD1Q8N539 461 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 FBXO22Q8NEZ5 403 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 CCDC43Q96MW1 224 aaKnown RBP31.45■■■□□ 2.63
ZNF558-206ENST00000599938 SAMD11Q96NU1 681 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 GCOM2Q9BZD3 368 aaPredicted RBP31.45■■■□□ 2.63
ZNF558-206ENST00000599938 LRFN2Q9ULH4 789 aa31.45■■■□□ 2.63
ZNF558-206ENST00000599938 RALGAPA2Q2PPJ7 1873 aa31.44■■■□□ 2.62
ZNF558-206ENST00000599938 DGKIO75912 1065 aa31.44■■■□□ 2.62
ZNF558-206ENST00000599938 TOB1P50616 345 aaPredicted RBP31.44■■■□□ 2.62
ZNF558-206ENST00000599938 CCDC85BQ15834 202 aaPredicted RBP31.44■■■□□ 2.62
ZNF558-206ENST00000599938 ZNF410Q86VK4 478 aa31.44■■■□□ 2.62
ZNF558-206ENST00000599938 NLRP4Q96MN2 994 aa31.44■■■□□ 2.62
ZNF558-206ENST00000599938 RGS18Q9NS28 235 aa31.44■■■□□ 2.62
ZNF558-206ENST00000599938 MTCH2Q9Y6C9 303 aa31.44■■■□□ 2.62
ZNF558-206ENST00000599938 LPXNO60711 386 aa31.43■■■□□ 2.62
ZNF558-206ENST00000599938 BTG3Q14201 252 aaPredicted RBP31.43■■■□□ 2.62
ZNF558-206ENST00000599938 SLC24A5Q71RS6 500 aa31.43■■■□□ 2.62
ZNF558-206ENST00000599938 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.43■■■□□ 2.62
ZNF558-206ENST00000599938 CRIPAKQ8N1N5 446 aa31.43■■■□□ 2.62
ZNF558-206ENST00000599938 PSPC1Q8WXF1 523 aaKnown RBP31.43■■■□□ 2.62
ZNF558-206ENST00000599938 TMEM143Q96AN5 459 aa31.43■■■□□ 2.62
ZNF558-206ENST00000599938 ZNF689Q96CS4 500 aaPredicted RBP31.43■■■□□ 2.62
ZNF558-206ENST00000599938 PCDHB6Q9Y5E3 794 aa31.43■■■□□ 2.62
ZNF558-206ENST00000599938 REV3LO60673 3130 aa31.43■■■□□ 2.62
ZNF558-206ENST00000599938 A0A087WZ62 844 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 GAS2O43903 313 aaKnown RBP31.42■■■□□ 2.62
ZNF558-206ENST00000599938 POU3F3P20264 500 aaPredicted RBP31.42■■■□□ 2.62
ZNF558-206ENST00000599938 FGFR4P22455 802 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 EPC2Q52LR7 807 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 KSR1Q8IVT5 923 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 ERMNQ8TAM6 284 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 FDXACB1Q9BRP7 624 aaPredicted RBP31.42■■■□□ 2.62
ZNF558-206ENST00000599938 ANKEF1Q9NU02 776 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 RNF216Q9NWF9 866 aaPredicted RBP31.42■■■□□ 2.62
ZNF558-206ENST00000599938 PCDHB7Q9Y5E2 793 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 COL4A3BPQ9Y5P4 624 aa31.42■■■□□ 2.62
ZNF558-206ENST00000599938 CUL4AQ13619 759 aa31.41■■■□□ 2.62
ZNF558-206ENST00000599938 DSC3Q14574 896 aa31.41■■■□□ 2.62
ZNF558-206ENST00000599938 TCP11Q8WWU5 503 aa31.41■■■□□ 2.62
ZNF558-206ENST00000599938 MTRQ99707 1265 aa31.41■■■□□ 2.62
ZNF558-206ENST00000599938 TUFT1Q9NNX1 390 aa31.41■■■□□ 2.62
ZNF558-206ENST00000599938 C9IYK1 514 aa31.4■■■□□ 2.62
ZNF558-206ENST00000599938 CSDE1O75534 798 aaKnown RBP31.4■■■□□ 2.62
ZNF558-206ENST00000599938 ZSCAN20P17040 1043 aaPredicted RBP31.4■■■□□ 2.62
ZNF558-206ENST00000599938 SFPQP23246 707 aaKnown RBP eCLIP31.4■■■□□ 2.62
ZNF558-206ENST00000599938 PTGDRQ13258 359 aa31.4■■■□□ 2.62
ZNF558-206ENST00000599938 PAN2Q504Q3 1202 aaKnown RBP31.4■■■□□ 2.62
ZNF558-206ENST00000599938 TMEM192Q8IY95 271 aa31.4■■■□□ 2.62
ZNF558-206ENST00000599938 CMTR2Q8IYT2 770 aaKnown RBP31.4■■■□□ 2.62
ZNF558-206ENST00000599938 C4orf32Q8N8J7 132 aa31.4■■■□□ 2.62
ZNF558-206ENST00000599938 PIGOQ8TEQ8 1089 aa31.4■■■□□ 2.62
ZNF558-206ENST00000599938 MED24O75448 989 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 SPATA31C1P0DKV0 1188 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 CTNNB1P35222 781 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 RARRES1P49788 294 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 GATMP50440 423 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 FXR2P51116 673 aaKnown RBP eCLIP31.39■■■□□ 2.62
ZNF558-206ENST00000599938 RILPL1Q5EBL4 403 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 LARP1BQ659C4 914 aaKnown RBP31.39■■■□□ 2.62
ZNF558-206ENST00000599938 CATSPER3Q86XQ3 398 aa31.39■■■□□ 2.62
ZNF558-206ENST00000599938 PRPF31Q8WWY3 499 aaKnown RBP31.39■■■□□ 2.62
ZNF558-206ENST00000599938 HAUS3Q68CZ6 603 aa31.38■■■□□ 2.61
ZNF558-206ENST00000599938 POLR3CQ9BUI4 534 aaPredicted RBP31.38■■■□□ 2.61
ZNF558-206ENST00000599938 INO80BQ9C086 356 aaPredicted RBP31.38■■■□□ 2.61
ZNF558-206ENST00000599938 ATP6V0A4Q9HBG4 840 aa31.38■■■□□ 2.61
ZNF558-206ENST00000599938 XPNPEP1Q9NQW7 623 aa31.38■■■□□ 2.61
ZNF558-206ENST00000599938 RWDD3Q9Y3V2 267 aa31.38■■■□□ 2.61
ZNF558-206ENST00000599938 DGAT1O75907 488 aa31.37■■■□□ 2.61
ZNF558-206ENST00000599938 LAMTOR4Q0VGL1 99 aa31.37■■■□□ 2.61
ZNF558-206ENST00000599938 POTEGQ6S5H5 508 aa31.37■■■□□ 2.61
ZNF558-206ENST00000599938 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.37■■■□□ 2.61
ZNF558-206ENST00000599938 TMEM161AQ9NX61 479 aa31.37■■■□□ 2.61
ZNF558-206ENST00000599938 A0A087WWV3 80 aa31.36■■■□□ 2.61
ZNF558-206ENST00000599938 LAD1O00515 517 aa31.36■■■□□ 2.61
ZNF558-206ENST00000599938 LINC00271P0C7V0 271 aa31.36■■■□□ 2.61
ZNF558-206ENST00000599938 RPA1P27694 616 aa31.36■■■□□ 2.61
ZNF558-206ENST00000599938 FERMT3Q86UX7 667 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms