RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NIFKQ9BYG3 293 aaKnown RBP15.45■□□□□ 0.06
SCAF1-203ENST00000598359 BRMS1Q9HCU9 246 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 ALG13Q9NP73 1137 aaKnown RBP15.45■□□□□ 0.06
SCAF1-203ENST00000598359 RGS18Q9NS28 235 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 COG5Q9UP83 839 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 PCDHB7Q9Y5E2 793 aa15.45■□□□□ 0.06
SCAF1-203ENST00000598359 RALGAPA2Q2PPJ7 1873 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 C9IYK1 514 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
SCAF1-203ENST00000598359 FGFR1P11362 822 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 PSMC5P62195 406 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 DSC3Q14574 896 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 PTPROQ16827 1216 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 TCEAL5Q5H9L2 206 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 SLC24A5Q71RS6 500 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 ALYREFQ86V81 257 aaKnown RBP15.44■□□□□ 0.06
SCAF1-203ENST00000598359 CMTR2Q8IYT2 770 aaKnown RBP15.44■□□□□ 0.06
SCAF1-203ENST00000598359 NLRP7Q8WX94 980 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 UBE2ZQ9H832 354 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-203ENST00000598359 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-203ENST00000598359 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 LIMCH1Q9UPQ0 1083 aa15.44■□□□□ 0.06
SCAF1-203ENST00000598359 KIAA1671Q9BY89 1806 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 TBKBP1A7MCY6 615 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 C5orf67F2Z3F1 127 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 ZBTB39O15060 712 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 DARSP14868 501 aaKnown RBP15.43■□□□□ 0.06
SCAF1-203ENST00000598359 KCNA5P22460 613 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 EIF4BP23588 611 aaKnown RBP15.43■□□□□ 0.06
SCAF1-203ENST00000598359 QARSP47897 775 aaKnown RBP15.43■□□□□ 0.06
SCAF1-203ENST00000598359 CYP4A11Q02928 519 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 TRIM29Q14134 588 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 DYDC2Q96IM9 177 aa15.43■□□□□ 0.06
SCAF1-203ENST00000598359 C11orf84Q9BUA3 381 aaPredicted RBP15.43■□□□□ 0.06
SCAF1-203ENST00000598359 A0A087WZ62 844 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 IGKV6-21A0A0C4DH24 114 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 TBX3O15119 743 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 RB1P06400 928 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 P4HBP07237 508 aaKnown RBP15.42■□□□□ 0.06
SCAF1-203ENST00000598359 ATP2B1P20020 1258 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 DNAJB1P25685 340 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 SPIRE1Q08AE8 756 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 CTTNQ14247 550 aaKnown RBP15.42■□□□□ 0.06
SCAF1-203ENST00000598359 TIGD5Q53EQ6 642 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 ODR4Q5SWX8 454 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 EP400NLQ6ZTU2 488 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 RHPN2Q8IUC4 686 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 RNF169Q8NCN4 708 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 NAP1L4Q99733 375 aaKnown RBP15.42■□□□□ 0.06
SCAF1-203ENST00000598359 FDXACB1Q9BRP7 624 aaPredicted RBP15.42■□□□□ 0.06
SCAF1-203ENST00000598359 LXNQ9BS40 222 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 CYP26B1Q9NR63 512 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 C1orf112Q9NSG2 853 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 SUCLA2Q9P2R7 463 aaPredicted RBP15.42■□□□□ 0.06
SCAF1-203ENST00000598359 RWDD3Q9Y3V2 267 aa15.42■□□□□ 0.06
SCAF1-203ENST00000598359 ATG2AQ2TAZ0 1938 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-203ENST00000598359 MAFO75444 373 aaPredicted RBP15.41■□□□□ 0.06
SCAF1-203ENST00000598359 BAG4O95429 457 aaKnown RBP15.41■□□□□ 0.06
SCAF1-203ENST00000598359 ITGB1P05556 798 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 GTF2F1P35269 517 aaKnown RBP eCLIP15.41■□□□□ 0.069e-7■■□□□ 14.5
SCAF1-203ENST00000598359 FAM189BP81408 668 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 CAMK1Q14012 370 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 EPHA7Q15375 998 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 CALCRLQ16602 461 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 SPOUT1Q5T280 376 aaKnown RBP15.41■□□□□ 0.06
SCAF1-203ENST00000598359 KLHL23Q8NBE8 558 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 CEP170P1Q96L14 293 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 NLRP4Q96MN2 994 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 NSUN3Q9H649 340 aaKnown RBP15.41■□□□□ 0.06
SCAF1-203ENST00000598359 ATP6V0A4Q9HBG4 840 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 RNF19AQ9NV58 838 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 PLAGL2Q9UPG8 496 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 PCDHGC5Q9Y5F6 944 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 BRWD1Q9NSI6 2320 aa15.41■□□□□ 0.06
SCAF1-203ENST00000598359 A0A087WWV3 80 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 H3BQ06 376 aaPredicted RBP15.4■□□□□ 0.06
SCAF1-203ENST00000598359 GPR37L1O60883 481 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 ZSCAN20P17040 1043 aaPredicted RBP15.4■□□□□ 0.06
SCAF1-203ENST00000598359 TXKP42681 527 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 DNM2P50570 870 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 TPH2Q8IWU9 490 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 SLFN12Q8IYM2 578 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 SPPL3Q8TCT6 385 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 TMEM143Q96AN5 459 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 PLVAPQ9BX97 442 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 TMEM60Q9H2L4 133 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 C11orf16Q9NQ32 467 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 TYW1Q9NV66 732 aaKnown RBP15.4■□□□□ 0.06
SCAF1-203ENST00000598359 TMEM161AQ9NX61 479 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 MYO7AQ13402 2215 aa15.4■□□□□ 0.06
SCAF1-203ENST00000598359 NEMFO60524 1076 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 YWHABP31946 246 aaKnown RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 MCM7P33993 719 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 IRS1P35568 1242 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 HYAL1Q12794 435 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 LONRF3Q496Y0 759 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 ECHDC2Q86YB7 292 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms