RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PLAGL2Q9UPG8 496 aa25.82■■□□□ 1.72
SSBP4-205ENST00000598159 SPTBN5Q9NRC6 3674 aaKnown RBP25.82■■□□□ 1.72
SSBP4-205ENST00000598159 BTBD18B2RXH4 712 aa25.81■■□□□ 1.72
SSBP4-205ENST00000598159 NCK2O43639 380 aa25.81■■□□□ 1.72
SSBP4-205ENST00000598159 IBSPP21815 317 aaPredicted RBP25.81■■□□□ 1.72
SSBP4-205ENST00000598159 TCEAL5Q5H9L2 206 aa25.81■■□□□ 1.72
SSBP4-205ENST00000598159 POTEDQ86YR6 584 aa25.81■■□□□ 1.72
SSBP4-205ENST00000598159 NLRP7Q8WX94 980 aa25.81■■□□□ 1.72
SSBP4-205ENST00000598159 GCOM2Q9BZD3 368 aaPredicted RBP25.81■■□□□ 1.72
SSBP4-205ENST00000598159 PPME1Q9Y570 386 aa25.81■■□□□ 1.72
SSBP4-205ENST00000598159 TMEM150BA6NC51 233 aa25.8■■□□□ 1.72
SSBP4-205ENST00000598159 LEXMQ3ZCV2 418 aa25.8■■□□□ 1.72
SSBP4-205ENST00000598159 FAM102BQ5T8I3 360 aa25.8■■□□□ 1.72
SSBP4-205ENST00000598159 C4orf19Q8IY42 314 aa25.8■■□□□ 1.72
SSBP4-205ENST00000598159 DIS3L2Q8IYB7 885 aaKnown RBP25.8■■□□□ 1.72
SSBP4-205ENST00000598159 ZNF668Q96K58 619 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-205ENST00000598159 SH2D3AQ9BRG2 576 aa25.8■■□□□ 1.72
SSBP4-205ENST00000598159 INO80BQ9C086 356 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-205ENST00000598159 CYP26B1Q9NR63 512 aa25.8■■□□□ 1.72
SSBP4-205ENST00000598159 XIRP2A4UGR9 3374 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 TTC28Q96AY4 2481 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 FAM205CA6NFA0 338 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 GATMP50440 423 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 DRP2Q13474 957 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 OTUD6AQ7L8S5 288 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 ZSCAN31Q96LW9 406 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-205ENST00000598159 LLPHQ9BRT6 129 aaKnown RBP25.79■■□□□ 1.72
SSBP4-205ENST00000598159 ALG13Q9NP73 1137 aaKnown RBP25.79■■□□□ 1.72
SSBP4-205ENST00000598159 AAASQ9NRG9 546 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 SUCLA2Q9P2R7 463 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-205ENST00000598159 PCDHA12Q9UN75 941 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 FNDC1Q4ZHG4 1894 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-205ENST00000598159 BRWD1Q9NSI6 2320 aa25.79■■□□□ 1.72
SSBP4-205ENST00000598159 MYO7AQ13402 2215 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 TBKBP1A7MCY6 615 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 HOXA2O43364 376 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 ST3GAL1Q11201 340 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 NCAPH2Q6IBW4 605 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 ZNF410Q86VK4 478 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 KLHL23Q8NBE8 558 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 SPPL3Q8TCT6 385 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 PABPC5Q96DU9 382 aaKnown RBP25.78■■□□□ 1.72
SSBP4-205ENST00000598159 PCDHB12Q9Y5F1 795 aa25.78■■□□□ 1.72
SSBP4-205ENST00000598159 ITGB1P05556 798 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 KCNA5P22460 613 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 SPIRE1Q08AE8 756 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 SAFBQ15424 915 aaKnown RBP eCLIP25.77■■□□□ 1.72
SSBP4-205ENST00000598159 C8orf34Q49A92 452 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 SPOUT1Q5T280 376 aaKnown RBP25.77■■□□□ 1.72
SSBP4-205ENST00000598159 RHPN2Q8IUC4 686 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 SLC7A3Q8WY07 619 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 CEP170P1Q96L14 293 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 ZSWIM4Q9H7M6 989 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 CHST12Q9NRB3 414 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 DACT1Q9NYF0 836 aa25.77■■□□□ 1.72
SSBP4-205ENST00000598159 A0A087WZ62 844 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 A0A0U1RQF3 1178 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 NPEPPSP55786 919 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 COL19A1Q14993 1142 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 CALCRLQ16602 461 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 PUS10Q3MIT2 529 aaKnown RBP25.76■■□□□ 1.71
SSBP4-205ENST00000598159 PLA2G4FQ68DD2 849 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 ECHDC2Q86YB7 292 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 CCDC83Q8IWF9 413 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 NEK9Q8TD19 979 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 DYDC2Q96IM9 177 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 NECAB3Q96P71 396 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-205ENST00000598159 FDXACB1Q9BRP7 624 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-205ENST00000598159 LXNQ9BS40 222 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 TYW1Q9NV66 732 aaKnown RBP25.76■■□□□ 1.71
SSBP4-205ENST00000598159 RGL1Q9NZL6 768 aa25.76■■□□□ 1.71
SSBP4-205ENST00000598159 WRAP73Q9P2S5 460 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-205ENST00000598159 EOMESO95936 686 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 FGFR1P11362 822 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 YWHABP31946 246 aaKnown RBP25.75■■□□□ 1.71
SSBP4-205ENST00000598159 RFC5P40937 340 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 FOSBP53539 338 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 CAMK1Q14012 370 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-205ENST00000598159 TMEM117Q9H0C3 514 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 DHX33Q9H6R0 707 aaKnown RBP25.75■■□□□ 1.71
SSBP4-205ENST00000598159 SH2B1Q9NRF2 756 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-205ENST00000598159 NCOR1O75376 2440 aa25.75■■□□□ 1.71
SSBP4-205ENST00000598159 KIAA1671Q9BY89 1806 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 NEMFO60524 1076 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 SLITRK3O94933 977 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 FGFR4P22455 802 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 SFPQP23246 707 aaKnown RBP eCLIP25.74■■□□□ 1.71
SSBP4-205ENST00000598159 POLGP54098 1239 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-205ENST00000598159 CTTNQ14247 550 aaKnown RBP25.74■■□□□ 1.71
SSBP4-205ENST00000598159 CSPP1Q1MSJ5 1256 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 TPH2Q8IWU9 490 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 POF1BQ8WVV4 589 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 PPP2R3CQ969Q6 453 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 CASD1Q96PB1 797 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 KIF2CQ99661 725 aa25.74■■□□□ 1.71
SSBP4-205ENST00000598159 TTC12Q9H892 705 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-205ENST00000598159 GAS2O43903 313 aaKnown RBP25.73■■□□□ 1.71
SSBP4-205ENST00000598159 CSDE1O75534 798 aaKnown RBP25.73■■□□□ 1.71
SSBP4-205ENST00000598159 HMGN5P82970 282 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms