RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CAND2O75155 1236 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 RSPH10BP0C881 870 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 MRPS6P82932 125 aaKnown RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 GIT2Q14161 759 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 LPIN1Q14693 890 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 IER5Q5VY09 327 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 RTN4RL1Q86UN2 441 aaPredicted RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 FMR1NBQ8N0W7 255 aaPredicted RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 METTL13Q8N6R0 699 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 LARP4BQ92615 738 aaKnown RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 CALML4Q96GE6 196 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 CELF4Q9BZC1 486 aaKnown RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 PRDM5Q9NQX1 630 aaPredicted RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 SUCLA2Q9P2R7 463 aaPredicted RBP11.76□□□□□ -0.53
LIG1-210ENST00000596332 KCNH3Q9ULD8 1083 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 CDY2AQ9Y6F7 541 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 EVPLQ92817 2033 aa11.76□□□□□ -0.53
LIG1-210ENST00000596332 ARHGEF35A5YM69 484 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 SFI1A8K8P3 1242 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 CSDE1O75534 798 aaKnown RBP11.75□□□□□ -0.53
LIG1-210ENST00000596332 EDN1P05305 212 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 CTSHP09668 335 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 RAG1P15918 1043 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 LIG1P18858 919 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 MAGEA10P43363 369 aaPredicted RBP11.75□□□□□ -0.53
LIG1-210ENST00000596332 ZNF131P52739 623 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 POLGP54098 1239 aaPredicted RBP11.75□□□□□ -0.53
LIG1-210ENST00000596332 NLRP11P59045 1033 aaKnown RBP11.75□□□□□ -0.53
LIG1-210ENST00000596332 LAMTOR4Q0VGL1 99 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 BFSP2Q13515 415 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 CAPSQ13938 189 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 KIZQ2M2Z5 673 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 FBXO47Q5MNV8 452 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 MAEAQ7L5Y9 396 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
LIG1-210ENST00000596332 STAMQ92783 540 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 ATP6V0A4Q9HBG4 840 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 LMBRD1Q9NUN5 540 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
LIG1-210ENST00000596332 ADGRA3Q8IWK6 1321 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 TET1Q8NFU7 2136 aa11.75□□□□□ -0.53
LIG1-210ENST00000596332 SCN5AQ14524 2016 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 CEP290O15078 2479 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 A0A087WZ62 844 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 HIP1RO75146 1068 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 CASP1P29466 404 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
LIG1-210ENST00000596332 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
LIG1-210ENST00000596332 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 AMHR2Q16671 573 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 PLEKHG4Q58EX7 1191 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 TMEM240Q5SV17 173 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 CNNM4Q6P4Q7 775 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 TAS1R3Q7RTX0 852 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 FAM228AQ86W67 206 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 RHPN2Q8IUC4 686 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 CRIPAKQ8N1N5 446 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 FSIP1Q8NA03 581 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 SLC7A3Q8WY07 619 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 DHX58Q96C10 678 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 REEP2Q9BRK0 252 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 FDXACB1Q9BRP7 624 aaPredicted RBP11.74□□□□□ -0.53
LIG1-210ENST00000596332 NTPCRQ9BSD7 190 aaKnown RBP11.74□□□□□ -0.53
LIG1-210ENST00000596332 POLR3FQ9H1D9 316 aaPredicted RBP11.74□□□□□ -0.53
LIG1-210ENST00000596332 TMX1Q9H3N1 280 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 COL4A3BPQ9Y5P4 624 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 TRPV2Q9Y5S1 764 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 NR2E3Q9Y5X4 410 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 SQORQ9Y6N5 450 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 KAT6AQ92794 2004 aa11.74□□□□□ -0.53
LIG1-210ENST00000596332 GAS2O43903 313 aaKnown RBP11.73□□□□□ -0.53
LIG1-210ENST00000596332 KLRC4O43908 158 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 ZNF202O95125 648 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 SLFN14P0C7P3 912 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 ACRP10323 421 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 DARSP14868 501 aaKnown RBP11.73□□□□□ -0.53
LIG1-210ENST00000596332 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
LIG1-210ENST00000596332 PTENP60484 403 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 EHHADHQ08426 723 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 RAD51AP2Q09MP3 1159 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
LIG1-210ENST00000596332 DSC3Q14574 896 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 C9orf50Q5SZB4 431 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 CCDC73Q6ZRK6 1079 aa11.73□□□□□ -0.53
LIG1-210ENST00000596332 GPBP1Q86WP2 473 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms