RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 GJB5O95377 273 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 LONP1P36776 959 aaKnown RBP20.32■□□□□ 0.84
ZNF558-204ENST00000596172 PBX2P40425 430 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 FAM173BQ6P4H8 233 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 RHPN2Q8IUC4 686 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 NLRP7Q8WX94 980 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 TOP1MTQ969P6 601 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 TMEM143Q96AN5 459 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 TIFAQ96CG3 184 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 PPP1R16BQ96T49 567 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 GCOM2Q9BZD3 368 aaPredicted RBP20.32■□□□□ 0.84
ZNF558-204ENST00000596172 TSPYL2Q9H2G4 693 aaPredicted RBP20.32■□□□□ 0.84
ZNF558-204ENST00000596172 COL4A3BPQ9Y5P4 624 aa20.32■□□□□ 0.84
ZNF558-204ENST00000596172 EVPLQ92817 2033 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 CDC25AP30304 524 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 ARL2P36404 184 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 RABGGTBP53611 331 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 POU5F1BQ06416 359 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 LAMTOR4Q0VGL1 99 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 NFX1Q12986 1120 aaKnown RBP20.31■□□□□ 0.84
ZNF558-204ENST00000596172 MXD4Q14582 209 aaPredicted RBP20.31■□□□□ 0.84
ZNF558-204ENST00000596172 RTN4RL1Q86UN2 441 aaPredicted RBP20.31■□□□□ 0.84
ZNF558-204ENST00000596172 FAM228AQ86W67 206 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 MCPH1Q8NEM0 835 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 RAD9AQ99638 391 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 INO80BQ9C086 356 aaPredicted RBP20.31■□□□□ 0.84
ZNF558-204ENST00000596172 TMX1Q9H3N1 280 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 DDX19AQ9NUU7 478 aaKnown RBP20.31■□□□□ 0.84
ZNF558-204ENST00000596172 DNM3Q9UQ16 869 aa20.31■□□□□ 0.84
ZNF558-204ENST00000596172 SIP14410 1827 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 A0A087WZ62 844 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 ARHGEF35A5YM69 484 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 RBAK-RBAKDNI3L0D1 243 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 EYA4O95677 639 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 CYP11B2P19099 503 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
ZNF558-204ENST00000596172 SLC39A14Q15043 492 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 ZNF697Q5TEC3 545 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 PADI6Q6TGC4 694 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 MYOCDQ8IZQ8 938 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 ZNF396Q96N95 335 aaPredicted RBP20.3■□□□□ 0.84
ZNF558-204ENST00000596172 SCLT1Q96NL6 688 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 USP28Q96RU2 1077 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 FDXACB1Q9BRP7 624 aaPredicted RBP20.3■□□□□ 0.84
ZNF558-204ENST00000596172 NT5C3AQ9H0P0 336 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 SEMA6BQ9H3T3 888 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 IFT122Q9HBG6 1241 aa20.3■□□□□ 0.84
ZNF558-204ENST00000596172 YBX2Q9Y2T7 364 aaKnown RBP20.3■□□□□ 0.84
ZNF558-204ENST00000596172 SRPRBQ9Y5M8 271 aaKnown RBP20.3■□□□□ 0.84
ZNF558-204ENST00000596172 TLL1O43897 1013 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 F13A1P00488 732 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 HTRA4P83105 476 aaPredicted RBP20.29■□□□□ 0.84
ZNF558-204ENST00000596172 DSC3Q14574 896 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 KSR1Q8IVT5 923 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 CRIPAKQ8N1N5 446 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 DEFB123Q8N688 67 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 LINC01599Q8WXQ3 324 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 ZBED2Q9BTP6 218 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 BHMT2Q9H2M3 363 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 RGS18Q9NS28 235 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 INSL6Q9Y581 213 aa20.29■□□□□ 0.84
ZNF558-204ENST00000596172 USO1O60763 962 aaKnown RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 UBA7P41226 1012 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 SRGAP1Q7Z6B7 1085 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 CABP7Q86V35 215 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 IFNLR1Q8IU57 520 aaPredicted RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 ZNF668Q96K58 619 aaPredicted RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 NLRP4Q96MN2 994 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 PNMA5Q96PV4 448 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 TTYH1Q9H313 450 aaPredicted RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 SLC28A3Q9HAS3 691 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 C1orf112Q9NSG2 853 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 BMP2KQ9NSY1 1161 aaPredicted RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 FBXO2Q9UK22 296 aaPredicted RBP20.28■□□□□ 0.84
ZNF558-204ENST00000596172 CHD9Q3L8U1 2897 aa20.28■□□□□ 0.84
ZNF558-204ENST00000596172 MGEA5O60502 916 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 SRGAP2CP0DJJ0 459 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 MYOGP15173 224 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 SFPQP23246 707 aaKnown RBP eCLIP20.27■□□□□ 0.84
ZNF558-204ENST00000596172 FAM189BP81408 668 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 GRIN1Q05586 938 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 GRB10Q13322 594 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 PKP1Q13835 747 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 TFDP1Q14186 410 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 PCBP1Q15365 356 aaKnown RBP eCLIP20.27■□□□□ 0.84
ZNF558-204ENST00000596172 TMEM119Q4V9L6 283 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 SLC24A5Q71RS6 500 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 TMCO2Q7Z6W1 182 aaPredicted RBP20.27■□□□□ 0.84
ZNF558-204ENST00000596172 LINC00301Q8NCQ3 95 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 ADAM2Q99965 735 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 NFKBIZQ9BYH8 718 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 CCSER1Q9C0I3 900 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 ZNF576Q9H609 170 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 CHST12Q9NRB3 414 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 MTMR10Q9NXD2 777 aa20.27■□□□□ 0.84
ZNF558-204ENST00000596172 DENND3A2RUS2 1198 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms