RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 OTUD6AQ7L8S5 288 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 TMEM192Q8IY95 271 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 FIBCD1Q8N539 461 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 C4orf32Q8N8J7 132 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 PPP1R16BQ96T49 567 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 ADAM2Q99965 735 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
USE1-207ENST00000596136 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 VCANP13611 3396 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 COL4A4P53420 1690 aaPredicted RBP14.61□□□□□ -0.07
USE1-207ENST00000596136 ADGRA3Q8IWK6 1321 aa14.61□□□□□ -0.07
USE1-207ENST00000596136 H3BNC9 293 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 GAS2O43903 313 aaKnown RBP14.6□□□□□ -0.07
USE1-207ENST00000596136 RB1P06400 928 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 XRCC6P12956 609 aaKnown RBP eCLIP14.6□□□□□ -0.07
USE1-207ENST00000596136 MCM7P33993 719 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 RFC5P40937 340 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 CTTNQ14247 550 aaKnown RBP14.6□□□□□ -0.07
USE1-207ENST00000596136 ZNF410Q86VK4 478 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 TPH2Q8IWU9 490 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 CMTR2Q8IYT2 770 aaKnown RBP14.6□□□□□ -0.07
USE1-207ENST00000596136 FBXO22Q8NEZ5 403 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 GDPD5Q8WTR4 605 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 SLC7A3Q8WY07 619 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 CEP170P1Q96L14 293 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 ELAC1Q9H777 363 aaKnown RBP14.6□□□□□ -0.07
USE1-207ENST00000596136 ANKEF1Q9NU02 776 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 SUCLA2Q9P2R7 463 aaPredicted RBP14.6□□□□□ -0.07
USE1-207ENST00000596136 MTUS1Q9ULD2 1270 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 RWDD3Q9Y3V2 267 aa14.6□□□□□ -0.07
USE1-207ENST00000596136 BRWD1Q9NSI6 2320 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 DENND3A2RUS2 1198 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 ZBTB39O15060 712 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 SPATA31C1P0DKV0 1188 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 ATP2B1P20020 1258 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 BMPR1AP36894 532 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 TOB1P50616 345 aaPredicted RBP14.59□□□□□ -0.07
USE1-207ENST00000596136 CYP4A11Q02928 519 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 BTG3Q14201 252 aaPredicted RBP14.59□□□□□ -0.07
USE1-207ENST00000596136 ZNF174Q15697 407 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 CCDC85BQ15834 202 aaPredicted RBP14.59□□□□□ -0.07
USE1-207ENST00000596136 TTC38Q5R3I4 469 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 NLRP7Q8WX94 980 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 GCOM2Q9BZD3 368 aaPredicted RBP14.59□□□□□ -0.07
USE1-207ENST00000596136 ARID2Q68CP9 1835 aa14.59□□□□□ -0.07
USE1-207ENST00000596136 FNDC1Q4ZHG4 1894 aaPredicted RBP14.59□□□□□ -0.07
USE1-207ENST00000596136 XIRP2A4UGR9 3374 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 A0A087WZ62 844 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 POTEMA6NI47 508 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 ASAP2O43150 1006 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 OR52Z1P0C646 297 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 GJB2P29033 226 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
USE1-207ENST00000596136 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 PPM1EQ8WY54 764 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 ZNF668Q96K58 619 aaPredicted RBP14.58□□□□□ -0.08
USE1-207ENST00000596136 FDXACB1Q9BRP7 624 aaPredicted RBP14.58□□□□□ -0.08
USE1-207ENST00000596136 POLR3CQ9BUI4 534 aaPredicted RBP14.58□□□□□ -0.08
USE1-207ENST00000596136 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 INO80BQ9C086 356 aaPredicted RBP14.58□□□□□ -0.08
USE1-207ENST00000596136 IFT122Q9HBG6 1241 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 TUFT1Q9NNX1 390 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 PRDM6Q9NQX0 595 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 CHST12Q9NRB3 414 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 NOL7Q9UMY1 257 aaKnown RBP14.58□□□□□ -0.08
USE1-207ENST00000596136 PCDHB7Q9Y5E2 793 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 TTC28Q96AY4 2481 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 MYO7AQ13402 2215 aa14.58□□□□□ -0.08
USE1-207ENST00000596136 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
USE1-207ENST00000596136 GPM6BQ13491 265 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 CUL4AQ13619 759 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 PDIA5Q14554 519 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 EMC2Q15006 297 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 CATSPER3Q86XQ3 398 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 RHPN2Q8IUC4 686 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 KSR1Q8IVT5 923 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 ATXN2LQ8WWM7 1075 aaKnown RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 TCP11Q8WWU5 503 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 PSPC1Q8WXF1 523 aaKnown RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 P2RX5Q93086 422 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 MRPL38Q96DV4 380 aaKnown RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 XPNPEP1Q9NQW7 623 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 LRFN2Q9ULH4 789 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.57□□□□□ -0.08
USE1-207ENST00000596136 COL4A3BPQ9Y5P4 624 aa14.57□□□□□ -0.08
USE1-207ENST00000596136 A0A0U1RQF3 1178 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 CSDE1O75534 798 aaKnown RBP14.56□□□□□ -0.08
USE1-207ENST00000596136 DGAT1O75907 488 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 MUTP22033 750 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 RPA1P27694 616 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 TECP42680 631 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 RARRES1P49788 294 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 POU5F1BQ06416 359 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 LAMTOR4Q0VGL1 99 aa14.56□□□□□ -0.08
USE1-207ENST00000596136 NAALADL2Q58DX5 795 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms