RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 MFSD14AQ96MC6 490 aa17.97■□□□□ 0.47
USHBP1-205ENST00000595993 C1orf112Q9NSG2 853 aa17.97■□□□□ 0.47
USHBP1-205ENST00000595993 WDR81Q562E7 1941 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 MSH4O15457 936 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 CSPG5O95196 566 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 MRE11P49959 708 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 FAM189BP81408 668 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 KCNC3Q14003 757 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 ZNF484Q5JVG2 852 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 SLC24A5Q71RS6 500 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 FAM184AQ8NB25 1140 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 MBOAT7Q96N66 472 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 ZNF577Q9BSK1 485 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
USHBP1-205ENST00000595993 LRFN2Q9ULH4 789 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 PCDHGC5Q9Y5F6 944 aa17.96■□□□□ 0.47
USHBP1-205ENST00000595993 EVPLQ92817 2033 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 CYP3A7-CYP3A51PA0A087WV96 503 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 DDX39AO00148 427 aaKnown RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 IPO5O00410 1097 aaKnown RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 FSCN2O14926 492 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 RPS6KA5O75582 802 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 C22orf31O95567 290 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 CYP3A7P24462 503 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 NFX1Q12986 1120 aaKnown RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 DSC3Q14574 896 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 Q4G0T1 1027 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 ODR4Q5SWX8 454 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 FAM160B1Q5W0V3 765 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 NEK8Q86SG6 692 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 FBXO18Q8NFZ0 1043 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 VN1R2Q8NFZ6 395 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 SUSD6Q92537 303 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 GJA10Q969M2 543 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 ADAM2Q99965 735 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 ELAC1Q9H777 363 aaKnown RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 BRMS1Q9HCU9 246 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 BARX2Q9UMQ3 279 aaPredicted RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 ST3GAL5Q9UNP4 418 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 USP15Q9Y4E8 981 aaPredicted RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 PCDHB7Q9Y5E2 793 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 PCDHB12Q9Y5F1 795 aa17.95■□□□□ 0.46
USHBP1-205ENST00000595993 MAFBQ9Y5Q3 323 aaPredicted RBP17.95■□□□□ 0.46
USHBP1-205ENST00000595993 WNT7AO00755 349 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 GPR182O15218 404 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 SLC37A4O43826 429 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 ATF7P17544 494 aaPredicted RBP17.94■□□□□ 0.46
USHBP1-205ENST00000595993 CRYBB1P53674 252 aaPredicted RBP17.94■□□□□ 0.46
USHBP1-205ENST00000595993 CUL4AQ13619 759 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 DUSP6Q16828 381 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 LETM2Q2VYF4 491 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 PDE12Q6L8Q7 609 aaKnown RBP17.94■□□□□ 0.46
USHBP1-205ENST00000595993 MOXD1Q6UVY6 613 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 TMEM184AQ6ZMB5 413 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 TRIM67Q6ZTA4 783 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 CDCA3Q99618 268 aaPredicted RBP17.94■□□□□ 0.46
USHBP1-205ENST00000595993 PHF7Q9BWX1 381 aaPredicted RBP17.94■□□□□ 0.46
USHBP1-205ENST00000595993 CWH43Q9H720 699 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 TLE6Q9H808 572 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 ZNF302Q9NR11 478 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 TLR9Q9NR96 1032 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 AAASQ9NRG9 546 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 TMEM161AQ9NX61 479 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 KMT2EQ8IZD2 1858 aa17.94■□□□□ 0.46
USHBP1-205ENST00000595993 BACH1O14867 736 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 GPR32O75388 356 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 FGF18O76093 207 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 GJB2P29033 226 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 ERVFC1P60507 584 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 PDXDC2PQ6P474 469 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 RBM23Q86U06 439 aaKnown RBP17.93■□□□□ 0.46
USHBP1-205ENST00000595993 FAM228AQ86W67 206 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 COLGALT1Q8NBJ5 622 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 BBXQ8WY36 941 aaPredicted RBP17.93■□□□□ 0.46
USHBP1-205ENST00000595993 SLC5A5Q92911 643 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 HCSTQ9UBK5 93 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 LZTS1Q9Y250 596 aa17.93■□□□□ 0.46
USHBP1-205ENST00000595993 MYH9P35579 1960 aaKnown RBP17.92■□□□□ 0.46
USHBP1-205ENST00000595993 DENND3A2RUS2 1198 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 TBKBP1A7MCY6 615 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 ZXDAP98168 799 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 PLCB3Q01970 1234 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 ZNF746Q6NUN9 644 aaPredicted RBP17.92■□□□□ 0.46
USHBP1-205ENST00000595993 SWSAP1Q6NVH7 229 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 MIS18BP1Q6P0N0 1132 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 LINC01465Q8N7H1 131 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 ETNPPLQ8TBG4 499 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 TBC1D22BQ9NU19 505 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 RNF19AQ9NV58 838 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 TYW1Q9NV66 732 aaKnown RBP17.92■□□□□ 0.46
USHBP1-205ENST00000595993 DDX25Q9UHL0 483 aaKnown RBP17.92■□□□□ 0.46
USHBP1-205ENST00000595993 GINS2Q9Y248 185 aa17.92■□□□□ 0.46
USHBP1-205ENST00000595993 TMEM221A6NGB7 291 aa17.91■□□□□ 0.46
USHBP1-205ENST00000595993 M0R296 226 aa17.91■□□□□ 0.46
USHBP1-205ENST00000595993 RBM10P98175 930 aaKnown RBP17.91■□□□□ 0.46
USHBP1-205ENST00000595993 SAFBQ15424 915 aaKnown RBP eCLIP17.91■□□□□ 0.46
USHBP1-205ENST00000595993 KIZQ2M2Z5 673 aa17.91■□□□□ 0.46
USHBP1-205ENST00000595993 PPP4R3AQ6IN85 833 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms